| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dret_1473 |
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| Symbol | |
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| ID | 8419302 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Desulfohalobium retbaense DSM 5692 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013223 |
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| Strand | + |
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| Start bp | 1702497 |
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| End bp | 1704506 |
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| Gene Length | 2010 bp |
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| Protein Length | 669 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 645038048 |
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| Product | TonB-dependent receptor |
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| Protein accession | YP_003198338 |
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| Protein GI | 258405596 |
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| COG category | [P] Inorganic ion transport and metabolism |
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| COG ID | [COG4771] Outer membrane receptor for ferrienterochelin and colicins |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 10 |
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| Fosmid unclonability p-value | 0.00220648 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGCACTCAC GATTGAGCAA GATCGCGCTC ATGGCCTTCG GGGTTTGCCT CTGGGCCGGC
ATTGGGGTGG CCGGAGCCCA GGAGACTCCG GCGAACGACC AAGTCTTTGA ACTCGGGGAG
ATCGTTGTCT CCAGCCCGGC CTCCCAGGTC GAAGCCGCTG GCAGCGTCGA TGTCATCACC
GCCGCGGACA TCAAAGAGGA CAATGCCCGA ACCCTGGACG AAGCCCTGGA TCTCGTCCCT
GGCATCTATG TCCGCCGTGG CAAGAAGGGC GTCCCGCGGA TCGACATGCG CGGCATGCGC
ACCCGGCAGA TTGAGCTGCT TCTCAACGGC ATCCCCATCA ATTCCAGTTA CGACAATCAG
TTTGACCCCA GTTTCATTCC GGTCGAGAAC ATCGCCCGGA TCAAGGTCAC CCGCGGGGCC
GGTTCGGTCC TTTACGGCTC CGGGGGCAAC GCCGGGGTGA TCAATATCAT TACCAAACGC
GGCGCCGAGG GCGTCCACGG TTCGCTCAAC GGCGAAGCCG CCCAGGGCGA CGCCTACCTC
GGCCGCGGCA CCCTGTCCGC GCGCAATGAA AACGGCAACA TCTTCATCAG TGGCAGCACC
TACAACCAGG AATACTTTCC CCTGGCCGAC GGCGCGGACG TCGATTCCCG TCTCGAAGGC
GGTGACGAGC GGGAAAACAG CGACCGCGAA AGCAGCCACC TCTTTACCAG CATGGAACTC
ACGCCCACGG ACCAAACCAC CCTGGCCCTG AACCTGGAAA TGCAGCAGGG CGAATACGGC
CGACCCCATG AAGTCCTGGT CGATGAATTC ACGGACAAAA AATACGAAAA TGACGACCCC
ACACGACTCA CCTTCGAGCG GGTCACTGAC CGCTCCAGCA TCGGCGGCCA ACTCGCCCTG
AGCCATGACC TCTCCGGGCC GCTTTCCTTC AAGACCTGGG GGTACGCCAC CCAACTCGAG
CAGACCGTGG ATCGCTTCGA CGACAAGACC TACACGACCC AGGACAAAGG GCGGCACACG
GAAAGCACCA CCTCGCGCTA CGGGTTGGCC GGCCAGGTGG CCCTGGATCT CCACCGTCTC
GGCGTGGCCA CCCTCGCTGC CTCTGCAGAG CAGGGGAATT GGGACAGCCG GGAGGAGAAG
TATGAAAAAG GGGCCATTGA TGAACTCAAT GAAATAGACA AGAACAACAA CATCTATTCC
ACCTCCTTGC AGTACGAGGT CGCCCCGACC AATGCCCTCG GTCTTGTCGC CGGTGCGGGC
TGGCACCAAC AGGAAAAGCA CAACGGCAGT ACCGGAGCCG ACTTCAGTTA CCAACTCGGC
GGTCACTACG ATCTGACCGC AACCACTCGC CTCAAGGCCA ACCACGCCCG GAAAATCCGC
TTTCCCTCCC TGCGTCGCCT GTATGAGGGC GATGACGCCA ACCCGGACCT GGAAGCCGAA
GTCACCTGGC ACTACGAGGC TGGCGTGGAA CAGGATATCC CCGGGTGGCA GACCAAGCTC
GGCCTGACCC TCTTTCACAT CGACGCCGAA GATTTTATCG AAAAAATTGG GGATGAACCC
TATAAAAACC AGGACAAATA CCGCTTCCAG GGCATCGAGG CGACCCTGGC CAACGAATCC
GTGGACAATC TCCGCCTGGA GGCGGCCTAC ACCTACCTCC AATCGGAAAA CCGCTCCGAC
GAAAGAGATT CGGACAAACT CCAGAACCGC CCGGAAAACA AGGTTTCGCT GAAGGCGACC
TACACCTGCC CCTGGGACCT CAAAATCTCA GGCTCCTACC TCTATGTGGG CGAGCGGTAC
GACTTTTCCA AGGATGAAGA CAGTCCTGGC AAGACCATCA CCCTCGACCC TTACCAGGTC
GTCAACCTCA AGCTGTCCAA GCCCCTGCCG AAGACCGGGT GGGAATTCTA TGCCGGTGTG
GACAACCTCT TTGACGAGGC CTACGCCGAG AACTACGCTT TGCCCCGTCC CGGACGCACC
GTGTACGGCG GTGTGGAATA CAGCTTCTAG
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| Protein sequence | MHSRLSKIAL MAFGVCLWAG IGVAGAQETP ANDQVFELGE IVVSSPASQV EAAGSVDVIT
AADIKEDNAR TLDEALDLVP GIYVRRGKKG VPRIDMRGMR TRQIELLLNG IPINSSYDNQ
FDPSFIPVEN IARIKVTRGA GSVLYGSGGN AGVINIITKR GAEGVHGSLN GEAAQGDAYL
GRGTLSARNE NGNIFISGST YNQEYFPLAD GADVDSRLEG GDERENSDRE SSHLFTSMEL
TPTDQTTLAL NLEMQQGEYG RPHEVLVDEF TDKKYENDDP TRLTFERVTD RSSIGGQLAL
SHDLSGPLSF KTWGYATQLE QTVDRFDDKT YTTQDKGRHT ESTTSRYGLA GQVALDLHRL
GVATLAASAE QGNWDSREEK YEKGAIDELN EIDKNNNIYS TSLQYEVAPT NALGLVAGAG
WHQQEKHNGS TGADFSYQLG GHYDLTATTR LKANHARKIR FPSLRRLYEG DDANPDLEAE
VTWHYEAGVE QDIPGWQTKL GLTLFHIDAE DFIEKIGDEP YKNQDKYRFQ GIEATLANES
VDNLRLEAAY TYLQSENRSD ERDSDKLQNR PENKVSLKAT YTCPWDLKIS GSYLYVGERY
DFSKDEDSPG KTITLDPYQV VNLKLSKPLP KTGWEFYAGV DNLFDEAYAE NYALPRPGRT
VYGGVEYSF
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