Gene Dret_1435 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDret_1435 
Symbol 
ID8419264 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfohalobium retbaense DSM 5692 
KingdomBacteria 
Replicon accessionNC_013223 
Strand
Start bp1668939 
End bp1669307 
Gene Length369 bp 
Protein Length122 aa 
Translation table11 
GC content62% 
IMG OID645038010 
ProductCupin 2 conserved barrel domain protein 
Protein accessionYP_003198300 
Protein GI258405558 
COG category[S] Function unknown 
COG ID[COG1917] Uncharacterized conserved protein, contains double-stranded beta-helix domain 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value0.438384 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones18 
Fosmid unclonability p-value0.13585 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCGACAA ATATCCCCTA TGTGGCTACG GCCGATAACG CCCCGGCTCA CGAGGTTCCT 
GCCGGTTCGA AAACCTCCAT GCAGGTCCTG ATCAGCGCGG AGCAGGCGCC CAACTTCGCC
ATGCGCCGGT TTCGCATCGA ACCGGGCGGG TCCATGCCCC GGCACACCAA CACAGTGGAG
CACGAACAAT TTGTCTTGCA CGGAGCGGCT GAACTTGCCC TCGGCGATGA AACCCGGCGG
GTCCAGGCGG GAGACGTCGT TCTCATTCCT GCCGGCCTAC CCCACGCCTA CACCTGCCTG
GGCGACGAGG CCTTTGTCTT TCTCTGCCTG GTGCCCAATG CCCCGGACCA TCTCGAAATC
CTGGAGTGA
 
Protein sequence
MSTNIPYVAT ADNAPAHEVP AGSKTSMQVL ISAEQAPNFA MRRFRIEPGG SMPRHTNTVE 
HEQFVLHGAA ELALGDETRR VQAGDVVLIP AGLPHAYTCL GDEAFVFLCL VPNAPDHLEI
LE