Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Dret_1428 |
Symbol | |
ID | 8419257 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Desulfohalobium retbaense DSM 5692 |
Kingdom | Bacteria |
Replicon accession | NC_013223 |
Strand | + |
Start bp | 1659653 |
End bp | 1660339 |
Gene Length | 687 bp |
Protein Length | 228 aa |
Translation table | 11 |
GC content | 63% |
IMG OID | 645038003 |
Product | DNA repair protein RadC |
Protein accession | YP_003198293 |
Protein GI | 258405551 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG2003] DNA repair proteins |
TIGRFAM ID | [TIGR00608] DNA repair protein radc |
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Plasmid Coverage information |
Num covering plasmid clones | 12 |
Plasmid unclonability p-value | 0.00255062 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | 17 |
Fosmid unclonability p-value | 0.0926898 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCCCCGGC AGGAAAGCAA ACCCCACTAT ATTGGTCATC GCCAGCGGCT CAAATCCCGC TTCGACGCCT CGCCGGAATC CGTCCCGGAC TACGAAATTC TGGAACTTTT ACTCGGGTAC GCCCTGCCCC AGCGCGACAC CAAACCTCTG GCCAAGGATC TGCTGGCCCG GTTCGGCACC CTCGGCTCTG TGCTGACCGC CTCCGGCCAA GCGCTTCAAG ACGTGCCGGG CGTCGGCCCC GGTGTGGGGC TTTTTTTCAC CCTCCTGCAG GAAACCCGGG CCCGGCAGGA ACAAAGCGGC CTGCTCGGCC GGGACGTCCT CTCCTCCCCG GAGCGCGTCG CCCGCATGGC CCGGGAGCGA TTCGGCCGTT TGAGCCACGA AGAGTTCTGG GTCGCCCTGG TGGACAACAA GAACCGACTT TGTGATTTTT GTCGGCTATT CACCGGTACT GTGGATCAGA CCGCCGTCTA TCCCCGCGAA GTCCTCCGGC TGGCCCTGAC CAAACAGGCC TCCGGGCTGA TCCTGGTCCA CAACCATCCC GGCGGCGACC CGACACCATC CCCCCAGGAC AAGGATCTCA CCAACCGTCT CCTGTCCGCC TCCCGGGAAC TCGGCTTCCG CATTCTGGAC CATGTCATCG TCTGTGAAGA AGCGTTTTTC AGCTTCCAGT CCTCGCACAT GCTCTGA
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Protein sequence | MPRQESKPHY IGHRQRLKSR FDASPESVPD YEILELLLGY ALPQRDTKPL AKDLLARFGT LGSVLTASGQ ALQDVPGVGP GVGLFFTLLQ ETRARQEQSG LLGRDVLSSP ERVARMARER FGRLSHEEFW VALVDNKNRL CDFCRLFTGT VDQTAVYPRE VLRLALTKQA SGLILVHNHP GGDPTPSPQD KDLTNRLLSA SRELGFRILD HVIVCEEAFF SFQSSHML
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