Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Dret_1292 |
Symbol | |
ID | 8419121 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Desulfohalobium retbaense DSM 5692 |
Kingdom | Bacteria |
Replicon accession | NC_013223 |
Strand | - |
Start bp | 1514016 |
End bp | 1514822 |
Gene Length | 807 bp |
Protein Length | 268 aa |
Translation table | 11 |
GC content | 56% |
IMG OID | 645037868 |
Product | ABC transporter related |
Protein accession | YP_003198158 |
Protein GI | 258405416 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG1126] ABC-type polar amino acid transport system, ATPase component |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 18 |
Plasmid unclonability p-value | 0.129998 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 22 |
Fosmid unclonability p-value | 0.577563 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGAAAACAG ATACACCCCC TCCCACTAAC GGCCAGAACG TGCAGACCCC GCTGATTTCT CTCAAGGATA TCGTCAAACG ATATGGAGAT CTCACCGCGG TTGACCACGT TTCTCTGGAG CTCGATCCCC AGGAACGGGT CGTGATTATC GGTCCTTCGG GTTCGGGGAA ATCGACCCTG TTGCGTGCCG TCAACTTTCT GGAGGAAATC GACGGCGGGG CCATTTATTT CGAAGGCCGC GAGGTCGGCT ATGTCGAAAA GAAGGGGCGC CGGGTCCTGG ACAAGCCCAA GCGCATCAGT CAGTTGCGCT CGGAAATCGG GATGGTCTTT CAACATTTTT ACCTTTTTCC GCACATGACG GTTATGGAAA ATGTCATGGA AGGCCCGCGC ACGGTGCAGA AGAAGCCGCT GCAGGAATGC CGGAATGTGG CCCTGGATAT GCTTCAAAAA GTGGGGCTTA CGGACAAAAA GGACATCTAT CCGGCCACGC TTTCCGGCGG CCAGAAACAA CGGGTGGCCA TTGCCCGGGC CCTGGCCATG CGGCCCAAGC TCATGCTTTT TGACGAACCG ACTTCCGCGT TGGACCCGGA ACTTGTCGGT GAGGTGTTCG ACGCCATCAA GACCTTGGCC GACGAGGGCA TGACCATGAT CGTGGTTACT CATCAGATGG GCTTTGCCCG GGAGATGGCT GACAGGGTCA TTTTCATGGA AGACGGCCGC TTTGTGGCTC AGGGAACCCC GACGGAATTT TTTGAAAACC ATCTCGACAG CGATCGGATC CGCAGCTTTT TGGAGCGTTC CCTGTGA
|
Protein sequence | MKTDTPPPTN GQNVQTPLIS LKDIVKRYGD LTAVDHVSLE LDPQERVVII GPSGSGKSTL LRAVNFLEEI DGGAIYFEGR EVGYVEKKGR RVLDKPKRIS QLRSEIGMVF QHFYLFPHMT VMENVMEGPR TVQKKPLQEC RNVALDMLQK VGLTDKKDIY PATLSGGQKQ RVAIARALAM RPKLMLFDEP TSALDPELVG EVFDAIKTLA DEGMTMIVVT HQMGFAREMA DRVIFMEDGR FVAQGTPTEF FENHLDSDRI RSFLERSL
|
| |