Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Dret_1267 |
Symbol | |
ID | 8419095 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Desulfohalobium retbaense DSM 5692 |
Kingdom | Bacteria |
Replicon accession | NC_013223 |
Strand | + |
Start bp | 1485394 |
End bp | 1486509 |
Gene Length | 1116 bp |
Protein Length | 371 aa |
Translation table | 11 |
GC content | 58% |
IMG OID | 645037842 |
Product | protein of unknown function UPF0118 |
Protein accession | YP_003198133 |
Protein GI | 258405391 |
COG category | [R] General function prediction only |
COG ID | [COG0628] Predicted permease |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 16 |
Plasmid unclonability p-value | 0.0792338 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 16 |
Fosmid unclonability p-value | 0.0741439 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCCCCTCA AATCATCCAC GGATCAAGCC CAGAAACGCG CCTTTGTTCT GCTCACAGCC GGTGTATCCG CCGGATTCCT TTGGCTGGTC AAAGGATTTT GGCAGCCGGT TTTTTGGGGG ATCCTTCTGG CCATCGTTTT TCAGCCGCTG TACCGGCAGG TCCTGCGCCT GTGTCACGGT CGCCAGCGCC TGGGATCCGT GATTACAGTG TCCAGTATCG TCCTGGGGGT AGTGCTGCCT CTTTTTGTCC TGGCCCTGGC GGTGATGCAG GAATCCCTGT CCCTGTATCA ACAGGTCCTT TCCGGAAAAA TCGACATCCA GCAACCGGTG CGCCTTGTCG AACAGTCTCT GCCACAGCTC GTAGACGGCT TGGAACGCAT TGGAATCGAC TTTGACCGGT TGCGGGAGAT TCTCTCCCAA ACCGCTCTGC GAGCCAGTCA GTTCCTGGCC AATCACCTCT TTCGCATCGG ACAAAGTACG GTCCAGGTTC TGATACAGAC ACTTATCATG CTCTATTTAT TGTATTTTTT CTTCAAGGAC GGACAAGGCA TTGTCAACGT CCTCGTCCGG ACCATCCCTT TGGGCGACAG GCGGGAACGG CTGCTTTTCA ACCGCTTTGC CGAGGTGGCT CGAGCCACAA TCAAGGGGAC CCTGGTCATC GGGATTGTTC AAGGCGGCAT CGGCGGTGGG CTGTTCTGGA TTCTGGGTCT CCAGGGCGCC TTGCTCTGGG GGGTATTGAT GGTCTTGCTG TCTATCCTGC CGGTGGTGGG CTCGGCATTG GTCTGGGGGC CGGCCGGGAT CATCCTCATC GCCACCGGGG CCTATCTGAA GGGTGGCATC CTGCTGGCCA CCGGTTCGGT GGTCATAGGG CTGGCGGACA ACATTCTCAG GCCGGCCCTG GTAGGGCGGG AAACCCGGCT CCCGGACTAT CTGATTCTGC TGGCCACCCT GGGTGGACTG GCGGTTTATG GTCTGGCCGG GTTTGTTATT GGACCGGTGG TGGCGGCCCT GTTTTTGACG GTCTGGGAAA TGTTCGGGCT CGAATTCGGC AAGGGCGACG TAGCGGCTGA AGAGGAGGGC GAAAAAGGGT TGTCGGATCA AACCGCAAAG TGCTAG
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Protein sequence | MPLKSSTDQA QKRAFVLLTA GVSAGFLWLV KGFWQPVFWG ILLAIVFQPL YRQVLRLCHG RQRLGSVITV SSIVLGVVLP LFVLALAVMQ ESLSLYQQVL SGKIDIQQPV RLVEQSLPQL VDGLERIGID FDRLREILSQ TALRASQFLA NHLFRIGQST VQVLIQTLIM LYLLYFFFKD GQGIVNVLVR TIPLGDRRER LLFNRFAEVA RATIKGTLVI GIVQGGIGGG LFWILGLQGA LLWGVLMVLL SILPVVGSAL VWGPAGIILI ATGAYLKGGI LLATGSVVIG LADNILRPAL VGRETRLPDY LILLATLGGL AVYGLAGFVI GPVVAALFLT VWEMFGLEFG KGDVAAEEEG EKGLSDQTAK C
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