Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Dret_1255 |
Symbol | |
ID | 8419083 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Desulfohalobium retbaense DSM 5692 |
Kingdom | Bacteria |
Replicon accession | NC_013223 |
Strand | + |
Start bp | 1470321 |
End bp | 1471688 |
Gene Length | 1368 bp |
Protein Length | 455 aa |
Translation table | 11 |
GC content | 65% |
IMG OID | 645037830 |
Product | metallophosphoesterase |
Protein accession | YP_003198121 |
Protein GI | 258405379 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG0420] DNA repair exonuclease |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 30 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 18 |
Fosmid unclonability p-value | 0.232414 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTGGCACT GTATCCGTGC CGGCTTGCGG GCTCCCCTGG TTACGCAGAG CAGCCCTGAA ACCTCACCCC CGGACACCAC CATGCGATTT ATATGTACCA GCGATCTCCA TCTGGGTCGC CGCTCGTCAC TGCCAAGCGG CAGTTCGGTG CCCGGTGACC ATTCTGCAGT GGCAGCCTGG GATCGTGTTG TAGGAGTCGC CCTGGAGCAG GCCGTTGATC TGGTCATTGT TGCCGGCGAT CTCGTCGACC AGGCCAATCG ATTTTTCGAA GCCCATGGCC CGCTGCACAG CGGTCTGTCC CGGTTGACTT CGGCCAATAT TCCCGTCCTG GCCATCGCCG GAAATCACGA TCACCAGACG CTGCCCTCCC TGGCCGAGAC CTTTTCCGGG CTCACGTTTG ACCTGCTCGG CCGCGAGGGC CGGTGGACGC AACGCCAATA CCAGTTTGGG CACCAGGTCC TGGAGGTGGT CGGGTGGTCC TTTCCGGACC GTTTCGTGGA AACCTGTCCC GTGCCGGATC TGCCGCCATC CTTGCCAGGA ACCACCCGCC GGGTCGGCAT TGTCCACGGG GAAGTCGGCC AATCCAGCAG CCGAAGTGCC CCCTTGCCCA CAGCCCGCCT TGAGGCGGCC GAGGTGGATT TCTGGGTTGC CGGGCATTAC CACACGCCTG GCTGGCAGCC GCAGACCGGC AGCGCCGCTG GAATTCTGGT CCCCGGCTCG CCTCAGGCCC TGGATCCCGG GGCGGTTGGC GTCCACGGAC CGTGGCTCGT CCGCTGGCCC TCTGCGGCGC CGCCAGAAGC CAGCCAGTGT CCGCTTTCCA CAATACGCTA CGAATATATC GATTGTGACA TCACCGGCTT GTCCGCGGAT CAAAGCCGGG AGCAGTTGGT GCGCTGCGTG CGCGAGGCCC TGGAGACCGC CTGCGCTGAA GACAGCGGCG GGGTCCTTGA ACACCTCGTC TGCCGGGTGA ATCTGGTTGG CCGCAGCAAT ATACAGCGCG AGATCCAGCA CACCGTCCAG GCTGCGGCGT CAGATCTGGA AGTCCACGTC GCCGCACGAA GCGCCAGCGT CGGCCGGGTT TTGTCGCAGA TTGTCCCGGA CCGGGACCTG GAGGAACTCG CCCGCGCCCA TGATCCGGTC GGGCATCTGG CCCGCATCCT CCTTGAGCTC GAAACCGGCG AGATCTCCCG AGAGACCCGC GACCTCCTGG GGTCCTGTCG CACTGAACTC GCAGGCGTCC TAAGCGCTCC GGCCTACGCC GGTCTGGACG CCGAGTCCCC GTCCGAAATC TTCTGCCGGG ATCACCTGCT CCATGAGGGC CGCCGGCTGC TGGAAACCCT TTTGGACCAG AAGGTCTCTT CAACATGA
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Protein sequence | MWHCIRAGLR APLVTQSSPE TSPPDTTMRF ICTSDLHLGR RSSLPSGSSV PGDHSAVAAW DRVVGVALEQ AVDLVIVAGD LVDQANRFFE AHGPLHSGLS RLTSANIPVL AIAGNHDHQT LPSLAETFSG LTFDLLGREG RWTQRQYQFG HQVLEVVGWS FPDRFVETCP VPDLPPSLPG TTRRVGIVHG EVGQSSSRSA PLPTARLEAA EVDFWVAGHY HTPGWQPQTG SAAGILVPGS PQALDPGAVG VHGPWLVRWP SAAPPEASQC PLSTIRYEYI DCDITGLSAD QSREQLVRCV REALETACAE DSGGVLEHLV CRVNLVGRSN IQREIQHTVQ AAASDLEVHV AARSASVGRV LSQIVPDRDL EELARAHDPV GHLARILLEL ETGEISRETR DLLGSCRTEL AGVLSAPAYA GLDAESPSEI FCRDHLLHEG RRLLETLLDQ KVSST
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