Gene Dret_1255 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDret_1255 
Symbol 
ID8419083 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfohalobium retbaense DSM 5692 
KingdomBacteria 
Replicon accessionNC_013223 
Strand
Start bp1470321 
End bp1471688 
Gene Length1368 bp 
Protein Length455 aa 
Translation table11 
GC content65% 
IMG OID645037830 
Productmetallophosphoesterase 
Protein accessionYP_003198121 
Protein GI258405379 
COG category[L] Replication, recombination and repair 
COG ID[COG0420] DNA repair exonuclease 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones30 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones18 
Fosmid unclonability p-value0.232414 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTGGCACT GTATCCGTGC CGGCTTGCGG GCTCCCCTGG TTACGCAGAG CAGCCCTGAA 
ACCTCACCCC CGGACACCAC CATGCGATTT ATATGTACCA GCGATCTCCA TCTGGGTCGC
CGCTCGTCAC TGCCAAGCGG CAGTTCGGTG CCCGGTGACC ATTCTGCAGT GGCAGCCTGG
GATCGTGTTG TAGGAGTCGC CCTGGAGCAG GCCGTTGATC TGGTCATTGT TGCCGGCGAT
CTCGTCGACC AGGCCAATCG ATTTTTCGAA GCCCATGGCC CGCTGCACAG CGGTCTGTCC
CGGTTGACTT CGGCCAATAT TCCCGTCCTG GCCATCGCCG GAAATCACGA TCACCAGACG
CTGCCCTCCC TGGCCGAGAC CTTTTCCGGG CTCACGTTTG ACCTGCTCGG CCGCGAGGGC
CGGTGGACGC AACGCCAATA CCAGTTTGGG CACCAGGTCC TGGAGGTGGT CGGGTGGTCC
TTTCCGGACC GTTTCGTGGA AACCTGTCCC GTGCCGGATC TGCCGCCATC CTTGCCAGGA
ACCACCCGCC GGGTCGGCAT TGTCCACGGG GAAGTCGGCC AATCCAGCAG CCGAAGTGCC
CCCTTGCCCA CAGCCCGCCT TGAGGCGGCC GAGGTGGATT TCTGGGTTGC CGGGCATTAC
CACACGCCTG GCTGGCAGCC GCAGACCGGC AGCGCCGCTG GAATTCTGGT CCCCGGCTCG
CCTCAGGCCC TGGATCCCGG GGCGGTTGGC GTCCACGGAC CGTGGCTCGT CCGCTGGCCC
TCTGCGGCGC CGCCAGAAGC CAGCCAGTGT CCGCTTTCCA CAATACGCTA CGAATATATC
GATTGTGACA TCACCGGCTT GTCCGCGGAT CAAAGCCGGG AGCAGTTGGT GCGCTGCGTG
CGCGAGGCCC TGGAGACCGC CTGCGCTGAA GACAGCGGCG GGGTCCTTGA ACACCTCGTC
TGCCGGGTGA ATCTGGTTGG CCGCAGCAAT ATACAGCGCG AGATCCAGCA CACCGTCCAG
GCTGCGGCGT CAGATCTGGA AGTCCACGTC GCCGCACGAA GCGCCAGCGT CGGCCGGGTT
TTGTCGCAGA TTGTCCCGGA CCGGGACCTG GAGGAACTCG CCCGCGCCCA TGATCCGGTC
GGGCATCTGG CCCGCATCCT CCTTGAGCTC GAAACCGGCG AGATCTCCCG AGAGACCCGC
GACCTCCTGG GGTCCTGTCG CACTGAACTC GCAGGCGTCC TAAGCGCTCC GGCCTACGCC
GGTCTGGACG CCGAGTCCCC GTCCGAAATC TTCTGCCGGG ATCACCTGCT CCATGAGGGC
CGCCGGCTGC TGGAAACCCT TTTGGACCAG AAGGTCTCTT CAACATGA
 
Protein sequence
MWHCIRAGLR APLVTQSSPE TSPPDTTMRF ICTSDLHLGR RSSLPSGSSV PGDHSAVAAW 
DRVVGVALEQ AVDLVIVAGD LVDQANRFFE AHGPLHSGLS RLTSANIPVL AIAGNHDHQT
LPSLAETFSG LTFDLLGREG RWTQRQYQFG HQVLEVVGWS FPDRFVETCP VPDLPPSLPG
TTRRVGIVHG EVGQSSSRSA PLPTARLEAA EVDFWVAGHY HTPGWQPQTG SAAGILVPGS
PQALDPGAVG VHGPWLVRWP SAAPPEASQC PLSTIRYEYI DCDITGLSAD QSREQLVRCV
REALETACAE DSGGVLEHLV CRVNLVGRSN IQREIQHTVQ AAASDLEVHV AARSASVGRV
LSQIVPDRDL EELARAHDPV GHLARILLEL ETGEISRETR DLLGSCRTEL AGVLSAPAYA
GLDAESPSEI FCRDHLLHEG RRLLETLLDQ KVSST