| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dret_1248 |
|---|
| Symbol | |
|---|
| ID | 8419076 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Desulfohalobium retbaense DSM 5692 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013223 |
|---|
| Strand | + |
|---|
| Start bp | 1462583 |
|---|
| End bp | 1464073 |
|---|
| Gene Length | 1491 bp |
|---|
| Protein Length | 496 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 60% |
|---|
| IMG OID | 645037823 |
|---|
| Product | hydroxylamine oxidase |
|---|
| Protein accession | YP_003198114 |
|---|
| Protein GI | 258405372 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 12 |
|---|
| Plasmid unclonability p-value | 0.0152054 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 23 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGTTTTGTC GACTCCTGTC CCTTCTTGTG GCCGGGGCCG TGCTGGCGGC CATGCCGGTC
TGGGCTGAAT CCCCTCCCCT GTCCGAGGCA ACGCTGTCCT GTCTCGGCTG TCATGAAGAC
CTCCACCCCG GCATGGTCGA GGGATGGCGG GCAAGCCGGC ACGCCCGGAT CACTCCTGGC
CAAGCCATGC AGACAACCGG TCTGGCCAGC AAAATCTCCA GCACCGACAT CCCTTCAGGA
TTGCAGGACA CTTCGGTCGG ATGCGCCGAA TGCCATACCC TGCGTCCTGA TGCCCACGCC
GATACCTTCG ACCATTTCGG CTACCAGGTC CACGTCGTTG TCAGCCCGGA GGACTGCGCC
ACCTGCCACG CCACAGAGCG CAAACAATAC GGCCAGAACA TCATGGCCCA TGCGTATGGC
AACCTGGTGG ACAATGCAGT CTACGCCGAT TTGCGCACGA GTATCAACGG AGTGCTTCAG
CCTGGCGAAA AACAACTCTC GGCCAAGGCC CCCAATAACG CCACCAAGGC CGAATCCTGT
CTGTATTGTC ACGGCACGAA ACTCCGGTTC GACGGTCTTG CAAGCAAAGA TACCGCCTAC
GGTCCTGTCA TGCTTCCTGA AATCGCCGGC TGGCCCAACC AGGGCTCCGG CCGGATCAAC
CTCGATGGGA GCAAGGGCTC CTGTGCGGTC TGCCACACCC GGCACCGGTT TTCCATGGCC
GAAGCCCGCA AGCCGTACAC CTGCAAAGAA TGTCATGTCG GCCCCGACGT TCCGGCGTAC
AAAGTTTACA CCGCCAGCAA ACACGGCACC ATCTATTCAG CCGAAAACAA CGACTGGGAT
TTTTCCGCTG TGCCCTGGGA AGCCGGGACC GATTTCCGGG CCCCAACCTG CGCCGCCTGC
CATATCAGCC TGGTGACCAA GCCCGGCGGC ACTGTAGTAG CTGAACGGAC CCACGCCCTG
TCGCCACGAC TGCCCTGGCG CATTTTCGGA CTGCCCTACG CCCATCCCCA GCCCAAAGAC
CCGCAGACCT CCAAAATCAA GAACGCCGCA GGCTTGCCGT TGCCCACCAA TCTCGACGGC
AGCCCCGCCT CGGATTTTCT TATCAGCGCG GAAGAGCAGG ACAAGCGGAA GGGCAATCTC
CAGGCCGTCT GCCTCTCCTG CCACACTCAG AGTTGGGTCG ACGGCCATTG GCAGCGCTTC
GAGAACACTA TCGAGGTCAC CAACGAAGCC ACGGCAACCG GCACCGGTCT TTTGGCTCAG
GCCTGGGAGA ATGACCTGGC CGAGGGACTG CCCCAGAACA GTTCCATTTT CGACGAATAT
ATTGAAAACG TCTGGAGCGA TATCTGGCTC ATCCATTGCA ACCACATCCG TTTTGCTTCG
GCCATTGGCG GCGGCGGTGA TTACGGTGTT TTTGCCGACG GCCGTTACGT GTTGAACAGG
CGTTTGCGCG AAATGCACGA CTGGGTCGAA TCACGCCTGC CGCAGCAATA A
|
|---|
| Protein sequence | MFCRLLSLLV AGAVLAAMPV WAESPPLSEA TLSCLGCHED LHPGMVEGWR ASRHARITPG
QAMQTTGLAS KISSTDIPSG LQDTSVGCAE CHTLRPDAHA DTFDHFGYQV HVVVSPEDCA
TCHATERKQY GQNIMAHAYG NLVDNAVYAD LRTSINGVLQ PGEKQLSAKA PNNATKAESC
LYCHGTKLRF DGLASKDTAY GPVMLPEIAG WPNQGSGRIN LDGSKGSCAV CHTRHRFSMA
EARKPYTCKE CHVGPDVPAY KVYTASKHGT IYSAENNDWD FSAVPWEAGT DFRAPTCAAC
HISLVTKPGG TVVAERTHAL SPRLPWRIFG LPYAHPQPKD PQTSKIKNAA GLPLPTNLDG
SPASDFLISA EEQDKRKGNL QAVCLSCHTQ SWVDGHWQRF ENTIEVTNEA TATGTGLLAQ
AWENDLAEGL PQNSSIFDEY IENVWSDIWL IHCNHIRFAS AIGGGGDYGV FADGRYVLNR
RLREMHDWVE SRLPQQ
|
|---|
| |