Gene Dret_1235 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDret_1235 
Symbol 
ID8419063 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfohalobium retbaense DSM 5692 
KingdomBacteria 
Replicon accessionNC_013223 
Strand
Start bp1448562 
End bp1449338 
Gene Length777 bp 
Protein Length258 aa 
Translation table11 
GC content66% 
IMG OID645037810 
ProductCobyrinic acid ac-diamide synthase 
Protein accessionYP_003198101 
Protein GI258405359 
COG category[D] Cell cycle control, cell division, chromosome partitioning 
COG ID[COG3640] CO dehydrogenase maturation factor 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value0.00902647 
Plasmid hitchhikingNo 
Plasmid clonabilitydecreased coverage 
 

Fosmid Coverage information

Num covering fosmid clones21 
Fosmid unclonability p-value0.593653 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAAATCG CGATTGCCGG TAAAGGTGGG GTAGGGAAAA CCACGTTCAC GGCCTGGCTG 
GCGGATTACC TGGCCCGCAA CGGGGCCAAC GTCTGGATGG TGGACGCGGA CACCGCCCTG
TCCCTGGGGC AGGCGTGTGG ACTCGAGCCG CAGGAGTTAC CCACCCCCCT GGTGCAGCGC
GAAGATCTCG TCCAAGAGCG CATTGGCTCC GGCATGCTGG CCCTCAATCC GGACGTGGCC
GATCTGCCGG ACCAGTTGGC CGTGGACGTC CCCCTGGGCG GGGACGCCAT TCGCCCGGGG
ACCAAACGCT TGTTGCTCAT GGGTTCCATT GCCGGCGCCG GCGGCGGGTG CGCCTGTCAT
GCCAACGCGC TTTTAAAAAG TGTTCTGGCT CACCTGATGC TTTCTCCCCA TGACTGGGTT
CTGGTGGACC TGGAGGCCGG CGTGGAGCAT CTTGGCCGGG GCACTGTGGC GGCGGTGGAT
CACCTGGCGG TGGTCAGCGA ACCGAGCCGG CGCAGCCTGG AAGTGGCTGG ACAGATTGCG
CGTATGGCCA TGGACCTCGG CCTGGCGCAG CAGACCCTGG TGCTCAACCG CGCCCCGATG
GGCATCCAAT TGCCGGACAT GGCGAATCTG CCGCAAGCGC GGCTGTCGCT CCCGGTCCTG
CCGGGGCTGG TGCAGCAGCA GCTCACCGAC GGCAACGTAC TCGGTCTGGC GGATCAGGAC
CGCGTGGACG CGGCTTTGGC CGAATTCGTT CTGGAACTCA GGAACCATTC GGCATGA
 
Protein sequence
MKIAIAGKGG VGKTTFTAWL ADYLARNGAN VWMVDADTAL SLGQACGLEP QELPTPLVQR 
EDLVQERIGS GMLALNPDVA DLPDQLAVDV PLGGDAIRPG TKRLLLMGSI AGAGGGCACH
ANALLKSVLA HLMLSPHDWV LVDLEAGVEH LGRGTVAAVD HLAVVSEPSR RSLEVAGQIA
RMAMDLGLAQ QTLVLNRAPM GIQLPDMANL PQARLSLPVL PGLVQQQLTD GNVLGLADQD
RVDAALAEFV LELRNHSA