Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Dret_1114 |
Symbol | |
ID | 8418941 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Desulfohalobium retbaense DSM 5692 |
Kingdom | Bacteria |
Replicon accession | NC_013223 |
Strand | - |
Start bp | 1306085 |
End bp | 1306963 |
Gene Length | 879 bp |
Protein Length | 292 aa |
Translation table | 11 |
GC content | 60% |
IMG OID | 645037688 |
Product | tol-pal system protein YbgF |
Protein accession | YP_003197980 |
Protein GI | 258405238 |
COG category | [S] Function unknown |
COG ID | [COG1729] Uncharacterized protein conserved in bacteria |
TIGRFAM ID | [TIGR02795] tol-pal system protein YbgF |
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Plasmid Coverage information |
Num covering plasmid clones | 23 |
Plasmid unclonability p-value | 0.875403 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 16 |
Fosmid unclonability p-value | 0.0458265 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGCCAGAC GATTCCTGTC AATGGTTATC AAAGGGACCT GCATCGCTGC CACCGGCCTG GTCCTGTCCG GGTGCGTCAT CAGTCAGCAG GATTTCAGCC GTTTGCAACA GCAGGTGGCC CAGCAAGGAC GAATGCAGCG GCAGATGCGT CAGGATGTAA AATCCCTGCG CAGCAGTTTG CAGCAAACAC AATCCCAGTT ACAGCAAAAG ATCGAGGCCA CAAGTTCCCC GGTCCGTTCG ACCCAGGCCA ATCTCACCGC TGATATGCGC TCTTTGCAGG TGGCGGTGGC CGAGGTTCGG GGCCGCGTCG ACGCGCTGGA GCGCCGGGTC GACTCCCTGG CTCGCACGCA GGCCAATGCC ACGGCCCAAC TGACTGACCT GACCTCCAAC AACACCGATG TTGCGCTGCC GGAAAACGCC ACGCAGCCGA GCCAACTCCA GGCGGGGCCA TCCAATGCCA CCAACGGCAC ACCGGCTGAG GCCGAGGCGC CGCAGACATT CGACTCGCCT CAGGCCATGT ACGACGAAGC CCTGGCCCAG TTCCGGAAAC GCAATTACCA GAATGCCCAG GCCTTATGGG CCCGCTTTAT TGATGAAAAT CCCAAGAGCG ACCTCGTCCC CAACGCCTAT TTCTGGCAGG GCGAGAGTTA TTACCAGAGC CAGAACTACG CCCGCGCCGT TTTGGCCTAC CAGGAAGTGA TCGAACGCTT CCAGGAAAGT TCCAAATACC GTCCGGCCCT GCTCAAACAG GGATTGTCGT TTTATAAACT CGGCAAGACC AAGCCCGGAC GATTGCTCTT GCAGCGAGTG ATCGACTCTG CACCGGATTC ACCCGAGGCC GGACGAGCCG AGGCGTTTCT GGAGCAGCGC TCGAATTGA
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Protein sequence | MARRFLSMVI KGTCIAATGL VLSGCVISQQ DFSRLQQQVA QQGRMQRQMR QDVKSLRSSL QQTQSQLQQK IEATSSPVRS TQANLTADMR SLQVAVAEVR GRVDALERRV DSLARTQANA TAQLTDLTSN NTDVALPENA TQPSQLQAGP SNATNGTPAE AEAPQTFDSP QAMYDEALAQ FRKRNYQNAQ ALWARFIDEN PKSDLVPNAY FWQGESYYQS QNYARAVLAY QEVIERFQES SKYRPALLKQ GLSFYKLGKT KPGRLLLQRV IDSAPDSPEA GRAEAFLEQR SN
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