| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dret_0978 |
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| Symbol | |
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| ID | 8418800 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Desulfohalobium retbaense DSM 5692 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013223 |
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| Strand | - |
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| Start bp | 1153241 |
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| End bp | 1154377 |
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| Gene Length | 1137 bp |
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| Protein Length | 378 aa |
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| Translation table | 11 |
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| GC content | 55% |
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| IMG OID | 645037547 |
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| Product | glycosyl transferase group 1 |
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| Protein accession | YP_003197844 |
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| Protein GI | 258405102 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0438] Glycosyltransferase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 21 |
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| Plasmid unclonability p-value | 0.625979 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 9 |
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| Fosmid unclonability p-value | 0.00043945 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGCGTATCG GATTTGACGC CAAACGGGCG TTTTGCAACA CCACCGGACT GGGCAATTAC
AGCCGGGGCG TGATCAAGAA TATGTGCACA TACCACCCTG AGCACACCTA TTTTCTGTAC
ACGCCGCCGC CCCAGACCAA TCTGTGCACC AAAACCATAA CCAAGAAGTG CGTCCGCGTC
CGGAAGCCCA AAAAAGGGCT CAGCCAGAAA GTCACCCCCT TGTGGCGCTC CTTCGGGCTG
GGCAATGATC TGGCTCAGGA CCGGATCGAT ATATACCACG GCTTGTCCAA CGAACTGCCG
TTTCGGAACA AGAAAAACGG GTTGAAGACG GTGGTCACCA TCCACGACCT CATCTTCATG
CGTTACCCGC ACTATTACAA TTACCTCGAC CGCCAAGTGT ACAAGGCGAA ATGCAAATAC
GCCTGTCAGC ACGCGGACAA AGTCATCGCG GTCAGCCAGC AGACGAAAGA AGACATCGTC
ACCTATTTCA ATGTCCCCTC GGACAAGGTC GAGGTCGTCT ACCAAAGCTG CGGGGAAGTC
TTCTACAATC AGTTTGAACG GCCCAAGCGG CAAAAGATCC TGCAGGAACT CGCTCTGCCC
GACGACTTCA TGCTCTTTGT CGGGTCGATC ACCGAGCGCA AAAACCTGAT GCGCATCGCC
GAGGCCCTGG CCATTCTCCG AGAACGGGAG AAGCATTTCC CGCCGCTGGT CGTAGTAGGG
AAAGGCAAGG AATATAAGGA AAAAGTCCTC TCCTTTCTCA AAGAGCACAA GCTCGGGGAA
AAGGTCATTT GGCGCACGAA TCTCCACATG CGCGACCTGG CCTGCCTGTT TCAGCAGGCG
AAGCTCTTTC TCTACCCCTC CCAGTTCGAG GGATTCGGCA TTCCGATTAT CGAGGCCCTG
TTCAGTAAGA CCCCGGTCAT CACCTCCAAC GGTTCCTGCT TTCCGGAAGC CGGGGGACCG
GATTCCTGGT ATGTTGATCC CGACAGTCCC GACGAACTGG CCACAGCCAT GCAGACCATC
CTCTCCGACA AGGAACTGCA GAAACGAATG GCCGAACGGG GATTTGATTA CGTCCAACGC
TTCCACAAAC AACAGGTCAC CGAGGACCTG ATGCAGCTCT ATCTCTCCTT GCGATGA
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| Protein sequence | MRIGFDAKRA FCNTTGLGNY SRGVIKNMCT YHPEHTYFLY TPPPQTNLCT KTITKKCVRV
RKPKKGLSQK VTPLWRSFGL GNDLAQDRID IYHGLSNELP FRNKKNGLKT VVTIHDLIFM
RYPHYYNYLD RQVYKAKCKY ACQHADKVIA VSQQTKEDIV TYFNVPSDKV EVVYQSCGEV
FYNQFERPKR QKILQELALP DDFMLFVGSI TERKNLMRIA EALAILRERE KHFPPLVVVG
KGKEYKEKVL SFLKEHKLGE KVIWRTNLHM RDLACLFQQA KLFLYPSQFE GFGIPIIEAL
FSKTPVITSN GSCFPEAGGP DSWYVDPDSP DELATAMQTI LSDKELQKRM AERGFDYVQR
FHKQQVTEDL MQLYLSLR
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