Gene Dret_0802 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDret_0802 
Symbol 
ID8418620 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfohalobium retbaense DSM 5692 
KingdomBacteria 
Replicon accessionNC_013223 
Strand
Start bp951257 
End bp952039 
Gene Length783 bp 
Protein Length260 aa 
Translation table11 
GC content60% 
IMG OID645037370 
Productprotein of unknown function DUF362 
Protein accessionYP_003197671 
Protein GI258404929 
COG category[S] Function unknown 
COG ID[COG2006] Uncharacterized conserved protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones27 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones21 
Fosmid unclonability p-value0.464584 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTGGACGT CTGTTCCATT CACCACATAC GAAAAGAGCA TCACCGAGGC CCTGGAAAGG 
TTACACGCCC CTGAGCTTTT GCAGCAGCAG GAAAACATCC TCATCAAGCC CAATCTGGTC
AACGCTTCGC CGCCGCCCGT GACCACACCG GTGGAATGTT GCGCAGCCCT CGTCGCCCTC
CTGCAAAACT GCACCTCGGC CTCAATCACT ATAGCCGAAG GCTCCGGCGC GGCCAACCTT
GAAACCGGGG AGATTTTCGA GGCCCTGGGG TATACAAAGC TGGCCCGCGA GACAGGGATC
TCCCTGCTCG ATCTGAACCA CACCGAGGTC GTGGAATGCC AGGATGCTCA GTGCAGTGCT
TTTCCGCGCA TGTACCTGCC CCAGGTGGCC TTTGAGAGTT TCATCATCTC CGTGCCTGTC
CTCAAAGCCC ATTCCCTGGC CGAGATGACC GGTAGCCTGA AAAATATGAT GGGCTTTGCC
CCGCCACACC ACTATGGCCA CTCCGGGGGG TGGAAAAAGG CTGCCTTCCA CGCCCGGATG
CACACGGCCA TAGCCGAGCT GAACAGATAC CGGGCTGCAG ATCTCACGAT CATGGACGCC
AGCCGCGGGC TGGCGCAATT TCACCTTGGC GGACCGGAAT GCGACCCGCC CCTCGAGACC
ATCCTGGCAG GCTGGGATCC GCTAGAGGTG GACCGTCAGG GCGCAGCCCT GTTGGGGCTG
GATTGGCGGA ATATTCCCCA CTTGGAAGCC CCGATCAGTT TGGGGCGGCA AGCCACAGCC
TGA
 
Protein sequence
MWTSVPFTTY EKSITEALER LHAPELLQQQ ENILIKPNLV NASPPPVTTP VECCAALVAL 
LQNCTSASIT IAEGSGAANL ETGEIFEALG YTKLARETGI SLLDLNHTEV VECQDAQCSA
FPRMYLPQVA FESFIISVPV LKAHSLAEMT GSLKNMMGFA PPHHYGHSGG WKKAAFHARM
HTAIAELNRY RAADLTIMDA SRGLAQFHLG GPECDPPLET ILAGWDPLEV DRQGAALLGL
DWRNIPHLEA PISLGRQATA