Gene Dret_0789 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDret_0789 
Symbol 
ID8418607 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfohalobium retbaense DSM 5692 
KingdomBacteria 
Replicon accessionNC_013223 
Strand
Start bp936929 
End bp937417 
Gene Length489 bp 
Protein Length162 aa 
Translation table11 
GC content54% 
IMG OID645037358 
Productbiotin/lipoyl attachment domain-containing protein 
Protein accessionYP_003197659 
Protein GI258404917 
COG category[C] Energy production and conversion 
COG ID[COG0508] Pyruvate/2-oxoglutarate dehydrogenase complex, dihydrolipoamide acyltransferase (E2) component, and related enzymes 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones34 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones27 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCAAAC GGACTTACAC CATCACGCTT GTGGCTATCG GCATATTCTG TGTTCTGGAC 
CTTTTCTTTC CGCCAAAACA CCACGCCGAA TACTTCTGGC ATGTCATGCC AGCCTTTGAA
GCCTTTTACG GTTTTCTTGG CTGTACGCTT ATCGTTGTCG TTTCCAAGGC CATCGGCAAA
CATTGGCTGT GGCAGGAAGC CACCACTGTC CCGCTTCCCA AGCGGGCCTT TGCTCAAGAT
CAGGACCAGG GCACGATCCG CCGCTGGTTT GTAAGCGAGG GAGATCAGGT CGACGCCGGA
CAGGATATGG TTGAGGTCGA AATCGGTGAC GCACGGCTGA TCATTGGCTC TCCCCAGGCC
GGGACAATCA TGCGCCGCTT TGTGGACCGC AACGACTTCA TTCATCCCGG CGAAACCCTC
GTTGATCTCA AAGTCTCCAA ATACGACGTT CAAGAACAAG TTGACGACAA GGTGATCATC
CATGGCTAG
 
Protein sequence
MSKRTYTITL VAIGIFCVLD LFFPPKHHAE YFWHVMPAFE AFYGFLGCTL IVVVSKAIGK 
HWLWQEATTV PLPKRAFAQD QDQGTIRRWF VSEGDQVDAG QDMVEVEIGD ARLIIGSPQA
GTIMRRFVDR NDFIHPGETL VDLKVSKYDV QEQVDDKVII HG