Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Dret_0712 |
Symbol | |
ID | 8418525 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Desulfohalobium retbaense DSM 5692 |
Kingdom | Bacteria |
Replicon accession | NC_013223 |
Strand | + |
Start bp | 846532 |
End bp | 848067 |
Gene Length | 1536 bp |
Protein Length | 511 aa |
Translation table | 11 |
GC content | 63% |
IMG OID | 645037276 |
Product | integral membrane protein MviN |
Protein accession | YP_003197582 |
Protein GI | 258404840 |
COG category | [R] General function prediction only |
COG ID | [COG0728] Uncharacterized membrane protein, putative virulence factor |
TIGRFAM ID | [TIGR01695] integral membrane protein MviN |
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Plasmid Coverage information |
Num covering plasmid clones | 20 |
Plasmid unclonability p-value | 0.83297 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 21 |
Fosmid unclonability p-value | 0.491449 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAGCCACA CGCGAAAAAT CGCCCGCAAC GCTTCTGTCG TCGCTGGGGC CACTTTGTTG AGCCGGGTCC TGGGATTTGT GCGCGATGTG GTCATCGCCT TTGCCCTGGG CGCAGGCCCC CTGGCCGACA GTTTCTTTGT CGCCTTCCGT CTCCCCAATC TCCTGCGCCG CCTGTTTGCC GAAGGGTCGT TGACTATGGC CTTTGTTCCG GTCTTTACTC GCAGTGACCG GTTCGACGGG CAGGACGAAG CCTTTGCAGT GGCGCGTTCG ACCGCGTTGT GGCTGCTCCT TCTCCTCGGT CTGCTGATGG GCGTGGCCAT CGTCGCGGCC AGGCCGTTGA CTCTTGTTAT CGCCCCGGGA TTTGCGGATA CTCCGGAGGT CGTGAATCAT ACCGCCCTTC TGGTGCGGAT CTGTTTTCCC TATATCCTGT TTATCTCCGG AGTCGCCCTG TGCATGGGCA TTCTCAATGC CCGGGACCAT TTTCTCGCTC CGGCGCTGGC GCCGTGCGTG CTCAATGCGG TGTTGATCAC CGCTTCGTTG GCGGCGGTCG CCTTGGGGTG GCCGGTGCCA ACGACCCTGG CCTTGGCCGT TCTTGTCGCT GGACTGGGGC AGTGGCTGCT CCAGCAGCCC TTTTTGCGCC GGCAAGGATT CTCCTGGTTC GGACCGGCCT CTTTGCGCCA CCCCGGGGTG CTGCGCATCG GCCGGTTGAT GCTCCCGACT GTTGTCGGGG CTGCAGTCTA TCAATTGAAC ATCGTTCTGG GAACCGTTCT GGCGTCGTTC TTGAGTCTGG GAAGCATCTC CTTTCTGTAT TATGCCGACC GGCTGGTGCA GTTCCCCCTG GGGGTCTTCG GGATCGCAGT CAGCCAGGCC GCCTTGCCGA GCTTTTCTCG TCTGGCCGCT GACGGCGCGC ATGAGGACCT GCTGCAGACG TTGAATAAGA CTCTGGGATT GCTCCTTTTT ATCAGTCTCC CGTCGGCTGC CGGCTTGATA GCGCTCTCAG AGCCGATGGT GGCGACCCTT TTTGGCCGCG GCGCGTTTAG TGCTGAAGCG GTGCAGGCTA CGGCCTGGGC TTTGGTCGGC TACAGCACAG GGCTCCCCGC TTTTTGTTGC GTGCGCTCGC TGGTCTCGAC CTATTACGCC CTGGAGGATA CCAAAACTCC GGTCAAGATC GCCACCCTCT GCCTGCTTCT CAACGGGGGG CTCGGTCTGC TGCTCATGCA ATTCTGGGCC CATGTCGGCC TGGCATTGGC GGTGGCCCTG GCCTCTTGGG CGAATGTTGT GTTGTTGCTG CGGGGATTGC GGGCCCATTT TAACGGACCG TGGATGGCGG TTCCCGGCGT CGTCCGCATG CTCGGCCTGA GCCTGCTGGT GGGCGTCGGC GCCTGGGTCA CGGCCGGGTG GGGCGGCTGG GCGCTTTTGG GGATCCCGTT CTGGGCCGCG GTCTATCTCG GTGCGGCCGG GATGTTGGGC ATGCCGGAGA CCGAACTCTT TTTTGACGGG ACTCGGCAAG TGCTGCGACG GGTGGGGAAG CGGTGA
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Protein sequence | MSHTRKIARN ASVVAGATLL SRVLGFVRDV VIAFALGAGP LADSFFVAFR LPNLLRRLFA EGSLTMAFVP VFTRSDRFDG QDEAFAVARS TALWLLLLLG LLMGVAIVAA RPLTLVIAPG FADTPEVVNH TALLVRICFP YILFISGVAL CMGILNARDH FLAPALAPCV LNAVLITASL AAVALGWPVP TTLALAVLVA GLGQWLLQQP FLRRQGFSWF GPASLRHPGV LRIGRLMLPT VVGAAVYQLN IVLGTVLASF LSLGSISFLY YADRLVQFPL GVFGIAVSQA ALPSFSRLAA DGAHEDLLQT LNKTLGLLLF ISLPSAAGLI ALSEPMVATL FGRGAFSAEA VQATAWALVG YSTGLPAFCC VRSLVSTYYA LEDTKTPVKI ATLCLLLNGG LGLLLMQFWA HVGLALAVAL ASWANVVLLL RGLRAHFNGP WMAVPGVVRM LGLSLLVGVG AWVTAGWGGW ALLGIPFWAA VYLGAAGMLG MPETELFFDG TRQVLRRVGK R
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