| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dret_0706 |
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| Symbol | |
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| ID | 8418519 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Desulfohalobium retbaense DSM 5692 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013223 |
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| Strand | - |
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| Start bp | 840959 |
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| End bp | 842815 |
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| Gene Length | 1857 bp |
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| Protein Length | 618 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 645037270 |
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| Product | ATP-dependent metalloprotease FtsH |
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| Protein accession | YP_003197576 |
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| Protein GI | 258404834 |
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| COG category | [O] Posttranslational modification, protein turnover, chaperones |
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| COG ID | [COG0465] ATP-dependent Zn proteases |
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| TIGRFAM ID | [TIGR01241] ATP-dependent metalloprotease FtsH |
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Plasmid Coverage information |
| Num covering plasmid clones | 28 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 20 |
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| Fosmid unclonability p-value | 0.437381 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGGAAGATT CGAACAACAA ATCACGGGAT ATCCGGCAAT ACGCCCGGAA CAATCCCTGG
ACCATACTCC TGTTTCTTTT GGTGTTCTGG TGGCTGTGGA GCAGTGTCAG CCAGTTCAAC
GCCCCGCCGC ACATCAGCTA CACGACCTTC TACAGTCAGT TGCGCAACGG CAATATCCAG
GAAGTGACCA TTCAGGGACC GCGGATTGAA GGCCGCCTTG ACTCTCCGGC CCAGCGCCAA
ATCGGGGACG GCCAGAGCGA AGAATTCTCC CGTTTTGTGA CCTACGTCCC CTCCTTCGGC
GACGAAACCC TGCTCACCCA GCTCGAGGAA AACGGGGTCA CCGTCCAGAC CGAGCCCGAA
CCCGATGCGA CATGGACGGA AATCCTGATC AGTTTTCTGC CCTTTATCCT GCTCATGGCC
CTTATCATCT ACCAGATCCG GCGCAGTCAG GGGCAGGGCG GCGGAATGTT TTCCATTGGC
AAGAACAAGG CCAAACTCTT TAATCGCAGT GAAGAAAGCG TAACCCTCGG GGATGTGGCC
GGCGCAGAAG GCGCCAAGAC TGAAATCCAG GAAATCATCG ACTTCTTGAA AAATCCCGAC
CAGATCCATG CCCTGGGCGG CAAGACTCCC AAAGGGTGCC TGCTCATCGG TCCGCCGGGC
ACGGGGAAGA CCCTGCTAGC CAGGGCTGTG GCCGGCGAGG CCGAGGTCCC GTTTTACTCC
ATCACCGGTT CTGATTTCAT GGAAATGTTT GTCGGCGTCG GCGCCTCCCG GGTCCGCAAT
CTCTTTCAGG AGGCCAAAAA GGAATCTCCG GCGATTATTT TTATCGACGA ACTCGATTCC
ATCGGGCGGC AGCGCGGCGC CGGACTCGGC GGGGGGCACG ACGAACGTGA GCAGACCCTC
AACCAATTGC TCTCGGAAAT GGACGGATTC GAGCCCACGG AAAACGTCGT GGTCATCAGC
GCCACCAACC GGCCGGATAT CCTCGACCCG GCCTTGATGC GCCCGGGCCG GTTCGACCGT
CGCATCACCG TTGACCTACC GAAAACCAAG GACCGCGAGG AGATCCTCGA GGTCTACGCC
CATTCCAAAC CCTTGGCCGA CGACGTGGAC ATGGCCGACC TCGCCCGGGG TACCCCTGGC
TTCAGCGGCG CCGATCTGGA AAACATGCTC AACGAAGCAG CCCTTTTGGC CGCACGCAAG
GGTGCCGACA CCATCCACAA GGAGGACATC GAGGAGGCCC GGGACAAAAT CCTGCTCGGC
CTGCAGCGCA AAGGACTGGC CTTGACGGAC GAGGAAAAGC GTATGATCGC CTACCACGAG
GCAGGACATG CCGCTGTCGG GGCCTTCAGC CCGACAGCCG ACCCGTTGCA CAAGATCTCC
ATCGTTCCGC GCACCCAATC CATGGGCGTG ACCCAGCAAT TGCCGGAACG CGAACGGTAT
ATCTATCCCA AGGAGTACAT GCTGGACCGC TTGAGCGTCA TGATGGGCGG CCGGGCCGCG
GAGACCCTGG TCTTCAACAC TTCCACCAGC GGCGCCGAAA ACGATCTCAA ACAGGCCACG
CAGCTCGCCA GACAAATGGT GCAGGACTGG GGCATGAGCG AGACTTTCCA GCACATGGCC
TTGGGGGGCC GCAGTCAACA AGTCTTTCTC GGCGAAGAAA TCGCCCAGCG CCGGGAGTAC
AGCGAAGCCA CGGCCCACGA AGTCGACAAG GAGATCCAGC GCATCCTGGC CGAGGCCTAC
GATCGTACGC TGCGCATCCT CACGGACCAT CGCGACGCCC TGGACCGTTT GGCTGAGGCC
CTGCTTGAGG ATGAAGAAAT CGAAGGGCGC AAGGCACTGA AATTACTTGG CGCCTGA
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| Protein sequence | MEDSNNKSRD IRQYARNNPW TILLFLLVFW WLWSSVSQFN APPHISYTTF YSQLRNGNIQ
EVTIQGPRIE GRLDSPAQRQ IGDGQSEEFS RFVTYVPSFG DETLLTQLEE NGVTVQTEPE
PDATWTEILI SFLPFILLMA LIIYQIRRSQ GQGGGMFSIG KNKAKLFNRS EESVTLGDVA
GAEGAKTEIQ EIIDFLKNPD QIHALGGKTP KGCLLIGPPG TGKTLLARAV AGEAEVPFYS
ITGSDFMEMF VGVGASRVRN LFQEAKKESP AIIFIDELDS IGRQRGAGLG GGHDEREQTL
NQLLSEMDGF EPTENVVVIS ATNRPDILDP ALMRPGRFDR RITVDLPKTK DREEILEVYA
HSKPLADDVD MADLARGTPG FSGADLENML NEAALLAARK GADTIHKEDI EEARDKILLG
LQRKGLALTD EEKRMIAYHE AGHAAVGAFS PTADPLHKIS IVPRTQSMGV TQQLPERERY
IYPKEYMLDR LSVMMGGRAA ETLVFNTSTS GAENDLKQAT QLARQMVQDW GMSETFQHMA
LGGRSQQVFL GEEIAQRREY SEATAHEVDK EIQRILAEAY DRTLRILTDH RDALDRLAEA
LLEDEEIEGR KALKLLGA
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