Gene Dret_0679 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDret_0679 
Symbol 
ID8418492 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfohalobium retbaense DSM 5692 
KingdomBacteria 
Replicon accessionNC_013223 
Strand
Start bp810415 
End bp810903 
Gene Length489 bp 
Protein Length162 aa 
Translation table11 
GC content63% 
IMG OID645037243 
Productphosphodiesterase, MJ0936 family 
Protein accessionYP_003197549 
Protein GI258404807 
COG category[R] General function prediction only 
COG ID[COG0622] Predicted phosphoesterase 
TIGRFAM ID[TIGR00040] phosphoesterase, MJ0936 family 


Plasmid Coverage information

Num covering plasmid clones32 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones21 
Fosmid unclonability p-value0.488967 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCGTATAG GTGTGTTGTC AGACACCCAT TTGCACGAGC CCACAGAAGC GTTCGCGGCC 
TTTTTTGAAC GCTTTCTGGC CCCGGCTGAC GTCCTTGTCC ATTGCGGTGA CATTGCCGGA
CCGTCCATGC TGGCTTTTCT GGAAAGCCAT GTTGCCTTGT ATGCGGTCAG CGGCAATATG
GACGTCCAAC TCGGGGAACT GCCTCCGGTG CGCAATGTGG CCCTCGGCGG GAACCGGCGA
CTGGGAGTGG TCCACGGCCA CAACCTTCCC GGTCGGGACA TCCCTCGGGC GGTGACCACC
TATTTTGGGG ATGGGCCGCG TTTGATCTGC TTCGGGCACA CCCATGAGCG GTACTGGGAG
GCTTTGTCCG ACGGGCGGTT TCTGCTCAAT CCCGGCAGTG TGACCCGTCC CAGGGACGGT
CGGCCGGGAG CGGCGCTCGT TGACTGGCCG GAGGACGGTC CGCCAGAGGT GCAGTGGGTG
GAGAGCTGA
 
Protein sequence
MRIGVLSDTH LHEPTEAFAA FFERFLAPAD VLVHCGDIAG PSMLAFLESH VALYAVSGNM 
DVQLGELPPV RNVALGGNRR LGVVHGHNLP GRDIPRAVTT YFGDGPRLIC FGHTHERYWE
ALSDGRFLLN PGSVTRPRDG RPGAALVDWP EDGPPEVQWV ES