Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Dret_0679 |
Symbol | |
ID | 8418492 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Desulfohalobium retbaense DSM 5692 |
Kingdom | Bacteria |
Replicon accession | NC_013223 |
Strand | + |
Start bp | 810415 |
End bp | 810903 |
Gene Length | 489 bp |
Protein Length | 162 aa |
Translation table | 11 |
GC content | 63% |
IMG OID | 645037243 |
Product | phosphodiesterase, MJ0936 family |
Protein accession | YP_003197549 |
Protein GI | 258404807 |
COG category | [R] General function prediction only |
COG ID | [COG0622] Predicted phosphoesterase |
TIGRFAM ID | [TIGR00040] phosphoesterase, MJ0936 family |
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Plasmid Coverage information |
Num covering plasmid clones | 32 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 21 |
Fosmid unclonability p-value | 0.488967 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCGTATAG GTGTGTTGTC AGACACCCAT TTGCACGAGC CCACAGAAGC GTTCGCGGCC TTTTTTGAAC GCTTTCTGGC CCCGGCTGAC GTCCTTGTCC ATTGCGGTGA CATTGCCGGA CCGTCCATGC TGGCTTTTCT GGAAAGCCAT GTTGCCTTGT ATGCGGTCAG CGGCAATATG GACGTCCAAC TCGGGGAACT GCCTCCGGTG CGCAATGTGG CCCTCGGCGG GAACCGGCGA CTGGGAGTGG TCCACGGCCA CAACCTTCCC GGTCGGGACA TCCCTCGGGC GGTGACCACC TATTTTGGGG ATGGGCCGCG TTTGATCTGC TTCGGGCACA CCCATGAGCG GTACTGGGAG GCTTTGTCCG ACGGGCGGTT TCTGCTCAAT CCCGGCAGTG TGACCCGTCC CAGGGACGGT CGGCCGGGAG CGGCGCTCGT TGACTGGCCG GAGGACGGTC CGCCAGAGGT GCAGTGGGTG GAGAGCTGA
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Protein sequence | MRIGVLSDTH LHEPTEAFAA FFERFLAPAD VLVHCGDIAG PSMLAFLESH VALYAVSGNM DVQLGELPPV RNVALGGNRR LGVVHGHNLP GRDIPRAVTT YFGDGPRLIC FGHTHERYWE ALSDGRFLLN PGSVTRPRDG RPGAALVDWP EDGPPEVQWV ES
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