| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dret_0620 |
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| Symbol | |
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| ID | 8418432 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Desulfohalobium retbaense DSM 5692 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013223 |
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| Strand | + |
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| Start bp | 744298 |
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| End bp | 745020 |
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| Gene Length | 723 bp |
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| Protein Length | 240 aa |
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| Translation table | 11 |
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| GC content | 43% |
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| IMG OID | 645037188 |
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| Product | pseudaminic acid CMP-transferase |
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| Protein accession | YP_003197495 |
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| Protein GI | 258404753 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG1083] CMP-N-acetylneuraminic acid synthetase |
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| TIGRFAM ID | [TIGR03584] pseudaminic acid CMP-transferase |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 0.0424075 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 11 |
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| Fosmid unclonability p-value | 0.00180398 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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| |
Sequence |
| Gene sequence | ATGACCGACA GCCAAAACAC GGAAAATCCA CAAACAGTCT GCATTATACC CGCTCGAAGC
GGCAGCAAAA GGATTCCAGA CAAAAATATC CGTCTTTTTT TGGGCAAGCC GGTTATCTGG
TATCCGATTC AGGCGGCCAG GGACTCAAAC CTTTTTGACC GGATTATCGT TTCCACAGAC
TCCGAGAAAA TTGCTGCCAT AGCCCGCGAG ACCGGTGCCG AAACCCCTTT TCTCCGCCCA
CAAGAATTGG CGGATGATTT TACACCGGTG ACAAATGTCT TTCAGCATGT AGTGCAATGG
ATGCGTAATA ATCAAATGGA TCCCAAGTTC ATATGCGGCA TGTATGCAAC AGCCCTTTTT
GTTCAAAAAG AACATTTGGT CCAAGGGTAT GATATGATTC GCAAAGGTAA ATCTGAAAGG
GCTTTTACAG TTGCTCCTTT CCCCTCACCC ATCTTTCGGG CTTTAAAAAT TAACAGGAAA
GGACATCTGG AAATGATATG GCCGGAAAAT TTCAAAACTC GATCCCAGGA TTTTTTCCAA
GTATACTACA ACGCCGGACA GTTTCACTGG TATCATGTAG ATTCCTTGAT GGAACCAAGT
CATAACACTG AATCAGTTTC CCCTATTATT ATTTCAAAAT ATTTAGCTAT AGATATTGAT
ACACAGGAGG ACTGGGAACA AGCTGAAATG ACTTATTGGG GTATACTCAA CTTTCGGAGA
TAG
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| Protein sequence | MTDSQNTENP QTVCIIPARS GSKRIPDKNI RLFLGKPVIW YPIQAARDSN LFDRIIVSTD
SEKIAAIARE TGAETPFLRP QELADDFTPV TNVFQHVVQW MRNNQMDPKF ICGMYATALF
VQKEHLVQGY DMIRKGKSER AFTVAPFPSP IFRALKINRK GHLEMIWPEN FKTRSQDFFQ
VYYNAGQFHW YHVDSLMEPS HNTESVSPII ISKYLAIDID TQEDWEQAEM TYWGILNFRR
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