Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Dret_0618 |
Symbol | |
ID | 8418430 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Desulfohalobium retbaense DSM 5692 |
Kingdom | Bacteria |
Replicon accession | NC_013223 |
Strand | + |
Start bp | 741786 |
End bp | 743003 |
Gene Length | 1218 bp |
Protein Length | 405 aa |
Translation table | 11 |
GC content | 34% |
IMG OID | 645037186 |
Product | hypothetical protein |
Protein accession | YP_003197493 |
Protein GI | 258404751 |
COG category | [S] Function unknown |
COG ID | [COG2327] Uncharacterized conserved protein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 20 |
Plasmid unclonability p-value | 0.511941 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 14 |
Fosmid unclonability p-value | 0.0191891 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAGCTATA ATATTTTATT ATATGGTGGA TATACTCTTT GGAGTGCTGG CGATGATGCA CCAATGCACT TTCTCACCAC ACAGCTTAAA AATAAAACTG ACAAGGATAT TAAATTTACT GTATTTTGCC GACATCCTAA TACAGAATTT GATACATATT ATAATGTAAA AACAAAACAA AACTTTGAAT ACAAAACAAA AGAGTTGTCG TCTGGAAGAT GGATGAGGGG GTTGAATTCT TCTGATAATA GGAAAGATTT GCTTGATATA GCTACAGAAA TCTCAGCATC GGACTTAATC ATCCTTGGTG CTGGTAATTT TATAACTGAA GTCTCATTGG ATGTATTAAG AGGGCATTTT GCACAGTTTG TAGTACTGAC TTTAATTGCA GATATGTGCC ATACACCTTG TATGCTTTTT GGATTAAGTG CGAATAAACT GAAAAATCCC TGGACAGCCA AGGCGGCCGG ATGGATGCTT CATCGAGCAT CATGCGTAAC ATTTCGTGAA AAAAATGCAG TTGAAAATTT AATAAGTAGC GATGTTTCTC TTCCTCAATA CGAATTACTG CCTGATGCTG CCCTTGGCTC TCCTGTTGCA AATATCAATC GAAGTAAAGA AATACTTCGC AATGAACATA TTGACTTATC AAACAAAAAG GTCTTAGCCA TATCAATTAG AGATTTATCC TGGATGAATG CGGATGAGAA ATATCAAAAA AATCTCAAGA ATACTATAGA TAAATGGCTT TATAGCGATA ACCAAAATGT TATTCTATTT ATTCCACAAT GTACCTATGA TGTTGAAAAT AGCTTAACAG ATGATAGATA TGTTGCTCAT AAATTGTCAA AACAAGTCAA CTTTCCGGAT AGATGTTTTC ATATTAAAAA CAAATATCAA GCACCAGACA TTGAATGTCT ATACCGTGAA GCTGATATAA CACTAGCAAC AAGACTTCAC GGTTCAGTAT TTTCAGCTAA AATGGGGACA CCAGTTATAG GTCTTTGCTA TGAAGATAAA GTGAAAGGAT TTTTTAGACA ACTAAATTGT CCTGAATTAG CTTTAAAATG GGATGAAGAA TCAGAAATAA TATTTAATAA GATTATGGGA GTATTGCAAA ACAAACAGCA CATAGTCAGT AAAATCAACG ACAATGTTTC GATTCTTCAA AAAAAATTAG GCCGGTATGT TGAACTTGCA TATAATCTTT TAACATAA
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Protein sequence | MSYNILLYGG YTLWSAGDDA PMHFLTTQLK NKTDKDIKFT VFCRHPNTEF DTYYNVKTKQ NFEYKTKELS SGRWMRGLNS SDNRKDLLDI ATEISASDLI ILGAGNFITE VSLDVLRGHF AQFVVLTLIA DMCHTPCMLF GLSANKLKNP WTAKAAGWML HRASCVTFRE KNAVENLISS DVSLPQYELL PDAALGSPVA NINRSKEILR NEHIDLSNKK VLAISIRDLS WMNADEKYQK NLKNTIDKWL YSDNQNVILF IPQCTYDVEN SLTDDRYVAH KLSKQVNFPD RCFHIKNKYQ APDIECLYRE ADITLATRLH GSVFSAKMGT PVIGLCYEDK VKGFFRQLNC PELALKWDEE SEIIFNKIMG VLQNKQHIVS KINDNVSILQ KKLGRYVELA YNLLT
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