| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dret_0567 |
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| Symbol | |
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| ID | 8418379 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Desulfohalobium retbaense DSM 5692 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013223 |
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| Strand | + |
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| Start bp | 687727 |
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| End bp | 689808 |
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| Gene Length | 2082 bp |
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| Protein Length | 693 aa |
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| Translation table | 11 |
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| GC content | 56% |
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| IMG OID | 645037135 |
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| Product | putative PAS/PAC sensor protein |
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| Protein accession | YP_003197442 |
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| Protein GI | 258404700 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG2206] HD-GYP domain |
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| TIGRFAM ID | [TIGR00229] PAS domain S-box |
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Plasmid Coverage information |
| Num covering plasmid clones | 32 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 36 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGGAAAAG AAACGGCCAT TAAGACCAAG ACCCTTAAAT TGGGTATCTT TCTCCTGTTG
CTTGTTCTCC TCGGCGCTAT TGTCTTCATC CAATGGAGTA CCGCTGAGAA AGAAGCCAGT
TTGGAACAGG AATTGGAAAC CCGCCTGGAG ATTCTTGGCA AGGGACGGGT GGAGGTCATC
TCCACGTGGC TGAGCGGGTT GGAGCGACAG GGAGATCGAG TGGTCCGTTC GGAAGTCTTC
CAATTGTACG CAGCCGAAGC CGATGCCATT GAAGAGGATA TTTCCCGCCT GGTCGGGGGG
GCTCCACTGC AAAGTGGCAG CGATGGGCTG CAGCAATTGG CGGCCCAATT GCCGATGATG
GAGACGCTAC TTAAGGAATT CGTGGAGTAT TCCGGTTTTC TGGCCGGACG CGTGGTCCAC
CGCAGCGGCA AAGCCTATGT CTCAACGCAA TCTTCCATAG CTCCCCTGAC TGGAAATCAA
AAGGATCTGG TGACGCAGTG TCTGGAGAAA AAGCGGGGGG TGTTCGCTCC TCTGCGATTT
ACAGCCAGCG GCCTTGTTCT GGATATGGCC CTGCCCATTT TTCCGCCGCA ACAACACAAC
CGGTTTGCCG AAAGCAAGCC GGTGGCGGCG TTATTGCTCA ATCGTGCGGT AACGGACAAG
ATTTCCGAAA TTCTGGCTGG AATTCCCTAC ACGGATCAGG GGCATCAGAC GCGACTTGTC
CAGACAAACA ACGGTGTCCA CCAGGAGATT GTTCCCTGGT TGCCCGACAG GCTGCGCCCT
ATTCCCTCCT TGCCCGCGGC TGAAAATCGT GAAGAGATTC CCTTTGCCGT GCGTCAGGAA
ATCGAAAACG GCAAACGGGT CTATTCTTTG GGTGTCAAAG TACCGGAACC GGGGTGGTGG
ATCATCCAGG AGCAGGATTA CCGTGTCGCC CGCGCCGACC TGCACTCCTA TCGGCGGACA
GCCATTTTTA TGACTATTCT GGGGGCCCTG CTTTTGGGCA CGGCGTTTGG CGCGGTCTGG
TGGCGTTTGA GCTTTGCCGA AAGTGAACGC ATCCGAGCCT GGTTTCGAGA TCTCAACAGC
CAGTTAGAGC GTCAGCGGTC GCTTTTGAAA AGTATTTATG AAACCGCTCC GGATTTTATT
GCTCTGAAAA GCGCCCAGGG AACGTATGAA TACGTCAATC CGGCCATGGC TGGGGCGTTG
GGGCGTGATG CCGATCAGGT GGTCGGTCAG GATGATGTGG CCCTGTTCGG GTATGATACC
GGCAAACGTT TGGAACGTTC AGACCACAAT GTCTACGCTC ATGGGCAGGA TGTCAGCGTC
ATCGAACAGG TCTATCTCCA ATCCCAGGCA CATACCCTCC AGTTTTCCAA AGCGCCTCAC
CGCGACAGCC AGGGGAATAT CGTCGGTATT GTCTCCATCG CCAAGGATAT CACTGCCATG
GTGGCTGCTC AGGAGCGCCA TGAGCGATTG GTGCGCAAAA CCGTTGAAGC CCTGGTCCGG
ACCGTGGAGA TGAGTGACCC CTATCTGGCG GGCCACTCCC GATTGATGGG TGCATTGGCC
GTCGCTCTGG GAGATTATAT GGAGGTTTCC TCTTCTGATC GGACGGCAAT GGAAATGGCG
GCGAATCTTT CTCAGATCGG GAAGTTGTTC ATCGACGAGT CTATTTTGAC CAAGACCGGG
ACCTTGACCG ACGAGGAGCG TGAGATCATG CAGCAGCATG TCGAACATGC TGAGCGCATC
CTGTGTGGGA TCGATTTCGA GATGCCGGTT CTGGACCTGC TCGCCCAAAT GAACGAGCAT
CTGGACGGCA GCGGCTACCC ATCCGGGAAG ATGGCAGAGG AGATTTCCTT GCCAGCCAGA
ATACTGGCGG TTGCCAATGC CTTTTGCGCC ATGATCCGTC CCAGAGCTTA CCGCCCGGCC
ATGCAGGTCG GCCAAGCCTT GGCTGTTTTA GAACAGCATG CCGGAACCAT ATACGACGGC
AGAGTCTTGG AGAACTTACG GCTTGTGTTG AACACGCGTC AGGGGGAGAG GCTGCTGGAA
CAGGCGAAAC AGGATACGTA TCGCGCGGAA TGCGGGATTT GA
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| Protein sequence | MGKETAIKTK TLKLGIFLLL LVLLGAIVFI QWSTAEKEAS LEQELETRLE ILGKGRVEVI
STWLSGLERQ GDRVVRSEVF QLYAAEADAI EEDISRLVGG APLQSGSDGL QQLAAQLPMM
ETLLKEFVEY SGFLAGRVVH RSGKAYVSTQ SSIAPLTGNQ KDLVTQCLEK KRGVFAPLRF
TASGLVLDMA LPIFPPQQHN RFAESKPVAA LLLNRAVTDK ISEILAGIPY TDQGHQTRLV
QTNNGVHQEI VPWLPDRLRP IPSLPAAENR EEIPFAVRQE IENGKRVYSL GVKVPEPGWW
IIQEQDYRVA RADLHSYRRT AIFMTILGAL LLGTAFGAVW WRLSFAESER IRAWFRDLNS
QLERQRSLLK SIYETAPDFI ALKSAQGTYE YVNPAMAGAL GRDADQVVGQ DDVALFGYDT
GKRLERSDHN VYAHGQDVSV IEQVYLQSQA HTLQFSKAPH RDSQGNIVGI VSIAKDITAM
VAAQERHERL VRKTVEALVR TVEMSDPYLA GHSRLMGALA VALGDYMEVS SSDRTAMEMA
ANLSQIGKLF IDESILTKTG TLTDEEREIM QQHVEHAERI LCGIDFEMPV LDLLAQMNEH
LDGSGYPSGK MAEEISLPAR ILAVANAFCA MIRPRAYRPA MQVGQALAVL EQHAGTIYDG
RVLENLRLVL NTRQGERLLE QAKQDTYRAE CGI
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