| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dret_0510 |
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| Symbol | |
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| ID | 8418318 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Desulfohalobium retbaense DSM 5692 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013223 |
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| Strand | + |
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| Start bp | 619487 |
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| End bp | 620833 |
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| Gene Length | 1347 bp |
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| Protein Length | 448 aa |
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| Translation table | 11 |
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| GC content | 54% |
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| IMG OID | 645037074 |
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| Product | trigger factor |
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| Protein accession | YP_003197385 |
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| Protein GI | 258404643 |
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| COG category | [O] Posttranslational modification, protein turnover, chaperones |
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| COG ID | [COG0544] FKBP-type peptidyl-prolyl cis-trans isomerase (trigger factor) |
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| TIGRFAM ID | [TIGR00115] trigger factor |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 0.155195 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 27 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGAATACC AGGTGGAGAA TATTTCCCCG GTGGAAAAGA AGATCACGGT GACGGTGCCC
GCAGAGGAGG TCAATGCGGC TCTGGGGGCG GCCATTGCCA TGTATCGCAA GGATGTCCAG
ATCGACGGCT TCCGCAAGGG CAAGGTCCCG AGTTCCATTG TCGAGAGCAA ATTCAAGAGC
CAGATTTATC AGGAAGCCAC AAACGACCTG CTCAACGTGC ATATCAACCA GATCATGGGC
GAACTCAATC TGCAGCCCCT GTCCGGACTA GATGTGGACG CCAAGGAGAT GGTCCGGGAC
CAGGATTACA TCTACACCTT CAGCTTTGAA AATGTCCCGG ACATTGATTT GCCCGAATAT
AAAGGTTTGA GCGGAACCAA AGAGAAGGTC GAGGCCAAGG AAGAGGATAT TCAGGAAGTC
TTGGACCGCG TACGCCAGAA CATGGCCTCT ATGGAAGAGG TAGATGAGGA CCGGACTCCC
AAGGACGGCG AAGTAGCGGT TGTCGATTTT ACCGCCGAGT ATGACGGCAA GCCCGTGGAA
GGGGGGGAGG CCCAGAACTT TGACCTTCCT CTCGGTGAAG GGCAATCGTT GCCGGAGTTC
GAGGAGCTGG TCAAAACCCT GACTCCTGGG GAACAGGCTG AAGAGGATAT CACTTTCCCG
TCCGATTTCC TGAACAAGGA TCTGGCCGAT GTGACCGTCA ACATGAAGGT CACTTTGAAG
GCGATCAAGC AGCGGGTCTT GCCGGAAGTG GATGACGATT TTGCTGAAAA GGCTGGCGGT
TTTGGTAGCG CCGAGGAAAT GCGCAAGGCA ATCAGCGAGT CCTATGAAAA CAGTCGCAAC
CAGGTGGCCA AGTCCGAAGC CCAGAAGGCG ATTTTGGACA AGATTCTTGA GCAGGTCGAC
TTTCCCTTAC CGCCGTCCAT GGTAGAAAAT CAGATCCAGG CCCAGATCAA ACAGCAGCGT
GAGCGGCTGG AGCGCCAGGG CAAAAGCCTG GAGTCGACTG GAACAAGTGA AGAGCAACTC
CGCGAGGAGT ACCGTCCCGA AGCCGAATCC CTGGTCAAAT CCCACCTTGT TTTGCTGGCC
ATTGCCAATA AAGAGGAGTT GTCGGTTTCG CCGCAGGAGG TCGAGCAGCA CCTGTATCAG
ATGGCGGTGC AAAGTGGCCA GGATTTCCAG ACCCTCAAGG AATACCATGA GAAAAATAAC
CTCATGTACG CCTTGCGGGA TCAGCTTCTT GCCGACAAAG CCATGGAGCT GATCTATGAC
AATGCCGAGG TCACCGAAGT CCCTGCCGGT GGATCTGATC AGGAATCCTC CGATGAGGAT
GACTCGGCCG CGACTGAGAA CGAATAA
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| Protein sequence | MEYQVENISP VEKKITVTVP AEEVNAALGA AIAMYRKDVQ IDGFRKGKVP SSIVESKFKS
QIYQEATNDL LNVHINQIMG ELNLQPLSGL DVDAKEMVRD QDYIYTFSFE NVPDIDLPEY
KGLSGTKEKV EAKEEDIQEV LDRVRQNMAS MEEVDEDRTP KDGEVAVVDF TAEYDGKPVE
GGEAQNFDLP LGEGQSLPEF EELVKTLTPG EQAEEDITFP SDFLNKDLAD VTVNMKVTLK
AIKQRVLPEV DDDFAEKAGG FGSAEEMRKA ISESYENSRN QVAKSEAQKA ILDKILEQVD
FPLPPSMVEN QIQAQIKQQR ERLERQGKSL ESTGTSEEQL REEYRPEAES LVKSHLVLLA
IANKEELSVS PQEVEQHLYQ MAVQSGQDFQ TLKEYHEKNN LMYALRDQLL ADKAMELIYD
NAEVTEVPAG GSDQESSDED DSAATENE
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