| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dret_0427 |
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| Symbol | |
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| ID | 8418232 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Desulfohalobium retbaense DSM 5692 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013223 |
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| Strand | - |
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| Start bp | 525856 |
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| End bp | 527238 |
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| Gene Length | 1383 bp |
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| Protein Length | 460 aa |
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| Translation table | 11 |
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| GC content | 59% |
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| IMG OID | 645036988 |
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| Product | glycosyl transferase group 1 |
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| Protein accession | YP_003197302 |
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| Protein GI | 258404560 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0438] Glycosyltransferase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 0.049978 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 21 |
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| Fosmid unclonability p-value | 0.496775 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTCTGCAA GCACCGTCAA CAATCGCACC CAACTCCAGG CCTTTACTCC GGAACGGATT
TACGACCCTG CCGAATTTGC TCCCTATATT GGCAAAGACA AAGTCGAGGG GCTGAAAAAA
CTGGCTGCTC CCCTGGAGGG GGCGGGATGG GCCAATGTCA ATTCCACCCT CATCGGTGGC
GGGGTGGCCG AAATCTTGCG CTCCGCCATC CCTCTGGGAC TGGGACTGGG ATTGGATGCC
CGGTGGCACG TCATTCAGGG CAACGACGCC TTTTTCCAGG TCACCAAGAA ATTTCACAAC
ATGCTCCAGG GCATGGATCT GGACATCAGC CTGGACGAGA TCTTTGACGC CTACCTCGGC
ACCATCGACC AGAACGCCCA GAACACCTTT ATCGCCTCCG ATCTGGTCGT CATCCACGAC
CCCCAGCCGG CGGCCATGGT CATGAACGGC TTTATTTTCG GCAATGTCCT CTGGCGCTGC
CATATCGACA CCTCTGAACC GAACCGGACC GTCTGGCGCT TTCTGCTCCC GTACATCAAC
CACTGCGCCG GGGCGATCTT CACCACGCCG CAGTTCGTCG GCCCCGGTCT GCAGATTCCA
CTCTACCAGA TCACCCCGTG CATTAATCCG CTGACGGACA AAAACCACCA GTTCAGTGAA
GAGGAAGCCC TGGACGTCTT GCGCCCTCTG CTCAACGAAC ACGATGTCGA CCCCGAACGC
CCCATCGTGG CCGCCATTTC CCGCTACGAC ATCCACAAAA ATCAGGAAAC AGTGCTCAAG
GCCTTCCAGA CTTACAGAGA ACAGAGTGCT CCCGATCCGG CGCCCTACCT CATTTTTCTC
GGCAACACGG CCACAGACGA CCCTGAAGGC GACGCCATGC TGGCCCATCT CCAAGAGGTG
GCGGGCGATG ACCCCGATGT CCGTTTTTGG GTCAACGTCC CGGACAATGA CCGTGTAGTG
GGCGCTTTAA ACCGCATCGC CAAAACCTTT GTCCACGTCT CAACCCGGGA AGGCTTCGGG
CTGGTCGTTT CCGAAGCCAT GTGGCAGGGC ACCCCGGTTA TCGGCTCGCG TACCGGCGGG
ATCGTGAACC AGATCCGCCA CGGGGAAACC GGGTTCCTGG TCGATCCGAT GGACACAGCC
ACGATCAGCA AACACCTCGG CACCCTTCTC GACGATCCGG ACCAGGCCCA GCAGATGGGC
GAACGGGCTC GGGAACACGT TCGCGAACAC TTCCTGCTGC CCGAACTGGT CCGCCGCTAT
CTGATCCTTA TCAGTTATTA CACTGGACGG TGCAACGAAC CGCCCCATTT CCGGCTCAAC
GACCTGAGCT ACAGTGAGGT CATCTGCATC ATGCGCCCAC GCCACCCGGC CCTGAGCCGC
TAA
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| Protein sequence | MSASTVNNRT QLQAFTPERI YDPAEFAPYI GKDKVEGLKK LAAPLEGAGW ANVNSTLIGG
GVAEILRSAI PLGLGLGLDA RWHVIQGNDA FFQVTKKFHN MLQGMDLDIS LDEIFDAYLG
TIDQNAQNTF IASDLVVIHD PQPAAMVMNG FIFGNVLWRC HIDTSEPNRT VWRFLLPYIN
HCAGAIFTTP QFVGPGLQIP LYQITPCINP LTDKNHQFSE EEALDVLRPL LNEHDVDPER
PIVAAISRYD IHKNQETVLK AFQTYREQSA PDPAPYLIFL GNTATDDPEG DAMLAHLQEV
AGDDPDVRFW VNVPDNDRVV GALNRIAKTF VHVSTREGFG LVVSEAMWQG TPVIGSRTGG
IVNQIRHGET GFLVDPMDTA TISKHLGTLL DDPDQAQQMG ERAREHVREH FLLPELVRRY
LILISYYTGR CNEPPHFRLN DLSYSEVICI MRPRHPALSR
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