Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Dret_0397 |
Symbol | |
ID | 8418202 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Desulfohalobium retbaense DSM 5692 |
Kingdom | Bacteria |
Replicon accession | NC_013223 |
Strand | + |
Start bp | 484885 |
End bp | 485799 |
Gene Length | 915 bp |
Protein Length | 304 aa |
Translation table | 11 |
GC content | 54% |
IMG OID | 645036959 |
Product | protein of unknown function DUF1568 |
Protein accession | YP_003197273 |
Protein GI | 258404531 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG1943] Transposase and inactivated derivatives |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 7 |
Plasmid unclonability p-value | 0.0000164254 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | 23 |
Fosmid unclonability p-value | 0.853679 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGACATTG AGGATGTGGT TGCAGCAGGT GGCAACCAGC GGGTTTTCCG GGCCAAGTAC AAGATTAACC AACCGGGGTT TATTTCGCAC ATTACCCAGC GAGCGGCAGG AAAAGAGCCG CTTTTTCTGG AAAAGGGAGA TTATCTGCAC TTCTTAGCGC TGCTGAAGGA GAGTGCTTCC CGGTTTGAGT TGGGCTATTA CGCGTTTTGT CTGATGCCCA ACCATGTCCA TTTGCTGGTT GAGCCGCACA AGCCGAACCT GGACAGTGGG ATGCACTCCC TGTTTTTTCG GTATGCCACG TTTTTTAACC GTAAATACCA ACGCCGGGGG CATCTCTTCG GCGGGCGATA TCGCCAAGCG CTGTGTCTTG CTCCAGATTA TTTGCTGACC GCTTCAGTCT ATATCCATCT TAACCCAGTG CGCGCCGGAC TGACCAAGAG GGCCAGCGAC TATCCATGGT CCTCTGCGGC GGTCTATTGC AGGCAGGCGG AGCAGGATTC CTTTCTTCTG CCCGAACGTA TATGTACTTT GGTGGCCGCA GACCCGGATG AAGCGCGGCA GGTGTACGCT CGGTTGCTGC ACCAGGGGCG GGCAGATGCT CCAGAGAATG CGCAGGAGCA GCCGGGGGTG ATTGAAAAAT TCTGTGATCG TCTTGGTGCC CGTTTTCCGA AACTGTTTGG GCGGTTGCAA AGCAAGCGAG TTCTTCCTCA CGATACTTCC ATGCCGTTGC AAGGCAGTCC TTCCCTTGAG CAGCTCCTTG CCCAGTTTCC AACTGGAAGC GCGAGGCGTC CGGAAACGCG ACAAGCCAAG AAGTATGTTC TGGAGCAACT TGAGGCCAGA GGGTTTCCCC GTAAAGAAAT AGCCGAACGC CTCGGTATTG CGCCGAAGAC GGTCTATAAT CTTTTGCACT CATGA
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Protein sequence | MDIEDVVAAG GNQRVFRAKY KINQPGFISH ITQRAAGKEP LFLEKGDYLH FLALLKESAS RFELGYYAFC LMPNHVHLLV EPHKPNLDSG MHSLFFRYAT FFNRKYQRRG HLFGGRYRQA LCLAPDYLLT ASVYIHLNPV RAGLTKRASD YPWSSAAVYC RQAEQDSFLL PERICTLVAA DPDEARQVYA RLLHQGRADA PENAQEQPGV IEKFCDRLGA RFPKLFGRLQ SKRVLPHDTS MPLQGSPSLE QLLAQFPTGS ARRPETRQAK KYVLEQLEAR GFPRKEIAER LGIAPKTVYN LLHS
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