| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dret_0356 |
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| Symbol | |
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| ID | 8418161 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Desulfohalobium retbaense DSM 5692 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013223 |
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| Strand | + |
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| Start bp | 443798 |
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| End bp | 445909 |
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| Gene Length | 2112 bp |
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| Protein Length | 703 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 645036922 |
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| Product | Tex-like protein protein-like protein |
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| Protein accession | YP_003197236 |
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| Protein GI | 258404494 |
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| COG category | [K] Transcription |
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| COG ID | [COG2183] Transcriptional accessory protein |
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| TIGRFAM ID | [TIGR00426] competence protein ComEA helix-hairpin-helix repeat region |
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Plasmid Coverage information |
| Num covering plasmid clones | 23 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 39 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGACGCAC TTCATACGTA TCTTGTTGAG AAGACGGGCA TTCCCGCCAA GGCTGTGGGC
AATATACTGG CCCTTTTTGA GAGCGGGGCC ACCATTCCCT TTATCGCCAG GTACCGCAAG
GACCAGACCG GCGGCGTTGA AGAGGAGCAG TTGCGCGCCT TTGAAGAGGC CTACCGCTCG
GCCGAGCGGC TCCTGGAGCG CAAGGCTGCG GTGCTGCGCT TGATCGAGGA GCGGGGCCAC
CTCACAGACG CTATCCGCGC CAAGGTCGAC GGGGCGCAGA GTCTGACCGA AGTGGAAGAT
ATCTACCGTC CCTACAAGGA GAAAAAGAGC ACCCGGGCCG GACGGGCGTT GGCCCAGGGC
CTCGGGCCGC TGGCCGATGT GTTGCAGCAG GCGGCTTTGT CCGAAGCCGC GTTTCGGGAC
AAGGCCCGGG CCTATGTGGG GGGAGAGGTC GCTGATGTGG ACCAGGCGGT GCAAGGTGCC
CAGGACATCC TCGCCGAGCG ATTGAGCGAT GACCCGCGGG AGCGGGAGGT CCTGCGCAAC
CAGGTCCGGC GCCACGGCGT GCTGGAGGTC AAACCCGGCA AAGCGTTTGA TACCCAAGGC
GTCTACGCCG GGTACGGCGA CTACCGGGAG AAACTCGCCG GGGTGGTCTC GCACCGGTAT
CTGGCGATTA TGCGCGGGGT GCGGGACAAG CAGCTCCGGG TCGCCATTCG GGTGGACCTC
GAGCGCACGC TGGCGAATAT CCTGCGCAGC AAGATCCCCA AGCGGGCCAC GTCAGTAGCG
GAACTGCTCC GGGCCGCGTA TCAGGACGGT CTCAAACGGC TGCTGTTTCC GGCGGTGGAG
CGGGAGATGC ATGCCGAGTT GAAGGAGCGG GCGGACCGGC AGGCGGTGGC CGTCTTCGGG
GCCAATCTGC GCCAGATGCT GATGACGCCT CCGGTGAGCG GTCAGGTGCT TATGGGCGTG
GACCCGGCCT ACCGCACTGG ATGCAAGTTG GCGGTCATCG ACCCCAACGG TAAGCTCCTG
GAAACCGGGG TCATCTTTCC CACCCCGCCG CAAAACGATG TCAGCGGGGC CGCGGCCACA
GTGCGCGAGC TGGTCCGCCG CCACCAGGTG CAGGGCGTGG CCATCGGCAA TGGGACCGCC
TCGCGCGAGA CCCAGGAGTT TTTCGCCGGA CTGAACCGTG ACCAGGGCTT GGGACTTAAA
TACACCGTGG TCTCTGAAGC CGGAGCCTCG GTCTATTCCG CCTCCAAGCT GGCCCAGGCC
GAATACCCGG ATCTGGACGT GACCCTGCGC GGGGCGATCT CCATCGCGCA GCGGCTGCGG
GACCCCATGG CCGAACTGGT CAAGATCGAC CCCAAATCCC TGGGGATCGG GCAGTACCAG
CACGATGTGG ATCAGAAGCT CCTGGCGCGC AAGCTGCACG AAACCATTGA GGATCTGGTC
AATCAGGTCG GCGTGGAGGT CAATAGCGCT TCCGCGGCCC TGCTCGGCTA TGTCGCCGGA
TTGGGGCCCA AGCTTGCGCG GGGGATTGTC GCGGACCGTG AGACGAAAGG CCCGTTTGGC
GGCAAAAAGG ACCTGCTCCG GGTTGCCGGG CTGGGGCCGA AAGCCTTTGA ACAATGCGCC
GGATTTCTTC GGATCCGGCA GGGGCGGGAC CTGCTGGACA ACACCGGGGT GCACCCGGAG
AGCTACGGAG CGGCCACGCG ACTGCGCGAG GAGTACGACC CCCACGTGCT CAGCGTCCAG
GACTGCGGGC CCATTGCTGC AAAGCTCGGC GTGGGAAGGC AGACCCTGAC GGACATTGTC
TTTGAACTGC AAAAACCGGG CTTTGATCCC CGGCAGACCT TGCCGGCCGT GCCGTTTCGC
GACGATGTCC GGGATATCGA GGCCCTGCGG GAAGGGGACA TTGTCTCCGG CGTGGTGCGC
AGCATCGTGG ACTTCGGGGC CTTTGTCGAT GTGGGGCTCA AAAACGACGG CCTGATCCAT
ATCTCCGAGC TGAGCCACAG CCGGGTCAGT CATCCCCTGG AGGTGCTGGC GGTGAACCAG
TACCTGCCCC GCATCCGCGT CCTCCGGGTG TTCCCGGAAA AAGGGCAGGT GGCTTTGAGT
TTGAAGGAGT AA
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| Protein sequence | MDALHTYLVE KTGIPAKAVG NILALFESGA TIPFIARYRK DQTGGVEEEQ LRAFEEAYRS
AERLLERKAA VLRLIEERGH LTDAIRAKVD GAQSLTEVED IYRPYKEKKS TRAGRALAQG
LGPLADVLQQ AALSEAAFRD KARAYVGGEV ADVDQAVQGA QDILAERLSD DPREREVLRN
QVRRHGVLEV KPGKAFDTQG VYAGYGDYRE KLAGVVSHRY LAIMRGVRDK QLRVAIRVDL
ERTLANILRS KIPKRATSVA ELLRAAYQDG LKRLLFPAVE REMHAELKER ADRQAVAVFG
ANLRQMLMTP PVSGQVLMGV DPAYRTGCKL AVIDPNGKLL ETGVIFPTPP QNDVSGAAAT
VRELVRRHQV QGVAIGNGTA SRETQEFFAG LNRDQGLGLK YTVVSEAGAS VYSASKLAQA
EYPDLDVTLR GAISIAQRLR DPMAELVKID PKSLGIGQYQ HDVDQKLLAR KLHETIEDLV
NQVGVEVNSA SAALLGYVAG LGPKLARGIV ADRETKGPFG GKKDLLRVAG LGPKAFEQCA
GFLRIRQGRD LLDNTGVHPE SYGAATRLRE EYDPHVLSVQ DCGPIAAKLG VGRQTLTDIV
FELQKPGFDP RQTLPAVPFR DDVRDIEALR EGDIVSGVVR SIVDFGAFVD VGLKNDGLIH
ISELSHSRVS HPLEVLAVNQ YLPRIRVLRV FPEKGQVALS LKE
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