Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Dret_0333 |
Symbol | |
ID | 8418137 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Desulfohalobium retbaense DSM 5692 |
Kingdom | Bacteria |
Replicon accession | NC_013223 |
Strand | + |
Start bp | 417251 |
End bp | 418681 |
Gene Length | 1431 bp |
Protein Length | 476 aa |
Translation table | 11 |
GC content | 63% |
IMG OID | 645036898 |
Product | protein of unknown function UPF0027 |
Protein accession | YP_003197213 |
Protein GI | 258404471 |
COG category | [S] Function unknown |
COG ID | [COG1690] Uncharacterized conserved protein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 25 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 38 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGACACAA GTCTTTTGCG GCGGATCAAT GCCTATTGTT GGGAAGTTCC CCAACAGGGC GCCATGCGGG TTCCAGGGCG TCTGTTCGGC AGCGGAGCCC TTATCCGCGA CCTCGACGAC ATGGTTCTGG AGCAGGTCAG CCAGGTCGCA GCCCTGCCAG GGATTGTCCG TGCTTCGCTG GCCATGCCCG ACGCCCACTG GGGGTACGGA TTCCCTATCG GGGGCGTGGC GGCCTTTGAT CCCGACCGTG GAGGCATTAT TTCCGTGGGC GGGGTGGGGT ATGATATTTC CTGCGGTGTG CGCACCTTGC GGACAGGATT GTCCAAAGAG GACGTCCTTT CTGTCTTACC GGAACTGGTG GATCTTTTGG CTACGGTGAT TCCTGCGGGG GTCGGACGCG GCGGACAGCT CAGGCTGTCC GGCTCCGAAC TCGACGATGT CCTGCGTCTG GGCGCGCGCT GGGCCGTGGC CCAAGGATAC GGAGAATCGC GGGATCTGGA ATATATCGAG GATGGCGGTT GCTTGAGCGG GGCGAATCCG GAGGTGGTTT CAGAAACGGC GAAAAAGCGG CAGCAGGATC AGGTCGGCAC CCTGGGCTCC GGCAACCACT ATCTGGAAGT CCAGTATGTG GATGCGATCT ATGACCAAGC AGCGGCCTTT GCCTTCGGGC TCAAAGAGGG CGGTGTCGTG GTTTCACTCC ATTGCGGCTC ACGGGCTCTG GGGCACCAGA TCGGCACCGA TTATATCCAA ATCCTGGGGC GGGCGGCGCA AAAACGCAGC CTGCACCTGC CCTCGCGGGA CCTGGTCTGC GCGCCCATCG ATTCCAAAGA GGGCCGCGAT TATTACCAGG CTATGGCCTG CGGTGTGAAT TGCGCCCTGG CCAACCGGCA GGTGCTGGGG CACCTGGTCC GGCAGGCCTT TGCCGAAATG TTTCCGTTGG CCCGTCTGGA ATTGCTCTAC GATGTGAGCC ACAACACCTG CAAGGTCGAA GACCACGATG TCGATGGACT GCGCAAGTCC CTGTATGTGC ACCGCAAGGG GGCGACCCGC TCTTTTGGGC CGGGGCGTCA GGAACTTCCA GCCGCCTACC GCGGCGTGGG ACAACCGGTG CTGATCGGTG GGACTATGGG GACGGCGTCG TATATTCTGG CCGGTACGGT GGAGAGCGAG GCCATGGCCT GGGGCTCGGC CTGCCACGGC GCCGGACGGG CCATGAGCCG CAAGCAGGCG ACGAAGCGGT GGAAAGGCAA GAGTGTACTC CACGAACTGG AACACCGCGG TATCCTGGTG CGTGCGGCCA GTCAGCGTGG TGTGGCTGAA GAGGCCCCGG GGGCCTATAA AGACGTCGAC GAGGTCGTGG AATCTACCCA CCATGCCGGG TTGGCGCGCA AGGTGGGCCG CTTGCGACCC CTGGCCTGTA TCAAGGGGTG A
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Protein sequence | MDTSLLRRIN AYCWEVPQQG AMRVPGRLFG SGALIRDLDD MVLEQVSQVA ALPGIVRASL AMPDAHWGYG FPIGGVAAFD PDRGGIISVG GVGYDISCGV RTLRTGLSKE DVLSVLPELV DLLATVIPAG VGRGGQLRLS GSELDDVLRL GARWAVAQGY GESRDLEYIE DGGCLSGANP EVVSETAKKR QQDQVGTLGS GNHYLEVQYV DAIYDQAAAF AFGLKEGGVV VSLHCGSRAL GHQIGTDYIQ ILGRAAQKRS LHLPSRDLVC APIDSKEGRD YYQAMACGVN CALANRQVLG HLVRQAFAEM FPLARLELLY DVSHNTCKVE DHDVDGLRKS LYVHRKGATR SFGPGRQELP AAYRGVGQPV LIGGTMGTAS YILAGTVESE AMAWGSACHG AGRAMSRKQA TKRWKGKSVL HELEHRGILV RAASQRGVAE EAPGAYKDVD EVVESTHHAG LARKVGRLRP LACIKG
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