| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dret_0259 |
|---|
| Symbol | |
|---|
| ID | 8418063 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Desulfohalobium retbaense DSM 5692 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013223 |
|---|
| Strand | - |
|---|
| Start bp | 320851 |
|---|
| End bp | 321921 |
|---|
| Gene Length | 1071 bp |
|---|
| Protein Length | 356 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 54% |
|---|
| IMG OID | 645036824 |
|---|
| Product | protein of unknown function UPF0118 |
|---|
| Protein accession | YP_003197139 |
|---|
| Protein GI | 258404397 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG0628] Predicted permease |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 29 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 46 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | GTGAACCTCA TCCGCGAATG GTTTCGCCGC CACTTTTCCG ACCCCCAGGT CGTCATTTTG
GCCTTGATTC TGATCAGCTG CATCCTGCTG ATCATGACGG TGGGCGATCT CATCGCACCG
GTGCTGGCCA GCGTGGTCCT GGCCTACCTT CTGGAGGGAC TGGTCCGTTT TCTGGAAAAC
CGCCGCGTCC CGCGCATGCT CGCCGTGTGC CTCGTTTTTC TCATATTCGT CTTTTTTCTC
TTTTTTCTTG TACTTGGATT GTTACCGCTG CTGTCGCAAC AGATTGTGCA ATTTTTTCAG
GAACTGCCGT CCATGCTCGC TGCTGGCCAA CGTGAACTCA TGCGTCTGCC GGAGCGCTAT
CCGAAATTTA TCACCGAAGA CCAGATCCTG GATGTGGTCG CTGCCCTGAA ATCCCAGCTC
ACCGGTCTGG GGCAACGGGT GCTCTCCATT TCCCTGGCCT CCGTCCGGTC GCTGTTTAAT
CTGCTGATTT ATATGATCCT GGTCCCGATC ATGGTTTTTT TCTTCCTGAA GGATAAATCC
AAGATCATCA ATTACATCAA GATGTTCATG CCCAAAGACT ATACCCTGAC CCGCCGGATC
TGGCACGACG TCGACCGCCA GATCGGCAAT TTCGTCCGGG GCAAAGTCTG GGAGATCCTC
ATTGTCTGGG GCGCGGCCTA CGGCCTGTTT CTGATCATCG ACCTCAACTA TGCTATTTTA
CTTAGCTTTC TTGTTGGGAT ATCCGTCATC GTGCCCTATG TCGGCGCCAC GGTCATGACC
CTGCCCGTGG CCCTGGTCGC CTACTTCCAA TGGGGTTGGG GGCAGGAATT TATCTACGCT
ATCATCGGGT ACACCATTTT GCAGATTCTG GACGGCAACC TGCTCGTGCC CCTTTTGCTC
AGTGAAGTGG TCAATCTCCA TCCTGTGGCC ATCATTGTGG CCATCCTCTT TTTCGGAGGC
ATCTGGGGCT TTTGGGGGGT CTTTTTTGCC ATTCCCCTGG CCACTTTGGT CCAATCTATC
ATCAACGCCT GGCCTCGCGC TGGCCAGCCC CAGCCGCCGG CCCCAAAATA A
|
|---|
| Protein sequence | MNLIREWFRR HFSDPQVVIL ALILISCILL IMTVGDLIAP VLASVVLAYL LEGLVRFLEN
RRVPRMLAVC LVFLIFVFFL FFLVLGLLPL LSQQIVQFFQ ELPSMLAAGQ RELMRLPERY
PKFITEDQIL DVVAALKSQL TGLGQRVLSI SLASVRSLFN LLIYMILVPI MVFFFLKDKS
KIINYIKMFM PKDYTLTRRI WHDVDRQIGN FVRGKVWEIL IVWGAAYGLF LIIDLNYAIL
LSFLVGISVI VPYVGATVMT LPVALVAYFQ WGWGQEFIYA IIGYTILQIL DGNLLVPLLL
SEVVNLHPVA IIVAILFFGG IWGFWGVFFA IPLATLVQSI INAWPRAGQP QPPAPK
|
|---|
| |