| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dret_0232 |
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| Symbol | |
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| ID | 8418036 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Desulfohalobium retbaense DSM 5692 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013223 |
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| Strand | + |
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| Start bp | 290664 |
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| End bp | 295196 |
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| Gene Length | 4533 bp |
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| Protein Length | 1510 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 645036797 |
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| Product | Glutamate synthase (ferredoxin) |
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| Protein accession | YP_003197112 |
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| Protein GI | 258404370 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0069] Glutamate synthase domain 2 |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 17 |
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| Fosmid unclonability p-value | 0.261044 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTCTATAG CTGAACGAGA CGCCTGTGCG ATCATCGCCC TGGTCAACAA ACAGGGTCAA
GCCACCCACG CCAACATTGT TCGGACCATC CAGGCCTTGA AACACATGGC CCACCGGTCA
GGGGACATCA ATGGCGAGGG GGACGGTTGC GGGATCACAA CGGATATCCC GACAGCGATC
TGGGGCCGAC ATCTGGAAAG TCAGGGCTTG TCCAGGCATC TGGCTGAAAG CCGGCGTTTT
TTTGTGGGCC ACCTCCTGTT GCCCAAAGAC CAAGCCCGTG ATGTTGGTGA CCTCCAGCGC
CGGGCCCGTG ATGTCTTTGC CCAACGTGAT CTGGAGATCC TTGTGGAAAA AGAGGACGGC
GCCCGCAGCG CTGAACTCGG TCCCCGGGGC CAGACGGAGG CGCCATTTTT CTGGCAGATC
GCCGGTCTGG TGCCTGATGG CGACCGGCAA CAGGCCCGTC GGACCCTTTT TGACCTCGAA
CTCGCCCTGG AGCGGGAGGT CCCGGCCTGG GCCCCGGCCT CGCTCAGTGT GGAATCGGTT
GTCTATAAGC TCCGGGGGGC TCCCGATCTT TTGCCGCGGG TCTACCCGGA ACTCCAGGAC
GAAAGCACCC GCTCGGTCAT GACTCTGGGG CACAGCCGGT ATTCCACGAA TACCCTGCCG
ACTGTGGAGC GTTCCCAGCC CTTTTCGCTT CTGGGGCACA ATGGGGAGAT CAACACCATA
GAACGATTGC GCAGCGCCGC CCGAGTTCTC GGCATCCCTC CAGTTCCTGG CGGAAGCGAT
TCGCAGGACC TCAACCGCAT CCTCGAGGGG TTGATCCATC TCCAGGGATT TGACCCCCTG
GAGGCTCTGG AAATGGTCTT TCCTGCCGTG GATTCCTTGG TCCAGCGATA CGACCCGGAG
TTGCAAAATG TGTATGCCTT GTACCGCTGG TTTTTTCCTC CGTCGGCCCA GGGTCCGGCT
GCTGTCGTGG CCCGCTCCGG GGATGTCTGT ATGGGCAGTG TCGACGCCCT TGGCCTGCGA
CCGCTGTGGT TCGGTGAAAG CGATTACGAC TGGTACCTGT CCTCGGAAAA AGGGGTCGTG
GACCTGGAAC TGACCATGAG CGACCCTGTG CCACTGGCCC CGGGAGAAAA GAAGGCGATC
GTCGCGGGAC GGGGCCGTCC GGCGGAAGTC AAGGATTATA GCGCCATTCA GAGTGAGTTG
GCGGCACTGC TCAAGCGGCG GCAAACGCTT TGGGAGAGCA CGAGGTCGTT GTACACAGCG
CCAATTCCCC TTTCGGAAGA CCACAGCGGT GACAAAGCAT CTGAAGCCCT CCCGGAAGAG
GTCCCCCTCG CTGCCCTCCG GGCCTTTGGC TGGCAGCACT ATGACCTGGA TATCCGCAAG
CAGGTTGTGC GCACCGGGCG GCCCGTTATC GGTTCCATGG GCCACCAGGC GCCTCTGGCC
TGCCTGCGCC AGGAGGCGCT GCCCACGCTT GCTGAATTTT TCAAAGAGGA AGTGGCGGTG
GTGACCAACC CGGCCATCGA CCGGGAGCGG GAAGGAGAAC ATTTTTCCAC CCGGATCCTC
TTGGGCAGCC GGCCGGATTG GCGCCACCTC AATGACAGCT CACCGGTGGG GTTGATGCTG
GAGACCCCGG TGCTTTTGGA CCGTTTGGTC CAGGATCATC TGACGCAGGA GGAATACAAG
GACTTGTGCC GGACCAGTGG CACCGTTGCT CTGGAGGAGG TTCAGGCCTT TTTCACCGCC
CAGGGGCGCG AACAAGAGCG CTTTGTCAGT CTGGACGCGA GTTTTTGCCC CGGGACGCAA
AGTCTGCAGG CCCGCCTGGA GGGATTGACC GCTGAAGCGA TCGAGGCGGT TGATGGCGGC
GCCTCCATTT TGGTCCTGGA CGATCAGAGG TGTTTTGAGC GCGCCTGCGC TCCTGTGGAT
CCGGGACTGG CGGTCAGCAC GATCGGCACC GCCCTGGAAG GGCAGGGACG GCGGCGCAGA
TGCGGACTGG TCGTGCGCTC CGGGGCGGTG CGCAACCTCC ACGATCTCAT GTTCCTGCTC
GGCCTCGGCG CTGATGCGGT GGCGCCGTAC CTTTTGTGGC AGGTGGCGCT GCAGACCAGG
GGGACCGCTA TCCCGGCCCA TGAGGCTGTG CAGCGGACCA TGCACGTTCT CCAGGTGGGG
ATGGAAAAGG TCATGTCCAC CATGGGCATC CATGAACTCT GCGGCTACGG GCGGATTTTC
GCCTCTGTCG GATTGGGCGC GGATGTTGCC GCTCACTTCG CGACAGCCAA TTTTTGTGCG
GGCATCACCG GCGGGCTCGA CTTTGCCGCC CTGGAACGCT TGGCCCGGTT GCGTGTGGAG
GCCTTCAATG CCTCCAGTCA GGAACGGTTG CACAAGGATC CTCCGCGTAA CCCCAAAGTG
GGGCGTCTGA TCCGCGGGGC GGCCACGGGA CAATTGGGAT ATGCCGAATT GGCCAAGGGC
CTCGACGCCC TTGAAGAAGA GCATCCCACG GCTTTGCGCC ATATATGGGA CGTGGCTCCG
CTGTCCGCTC AGCCTGGGAA GCGGCTGGCC ATGGACGAGG TGGACATCGG AATCGGGGAG
CACGCCATGC CGGTGGTCAT TGCCGCCATG TCTTTCGGCT CCCAGGGCGA AAATTCCTTC
CGTGCCTACG CTCGGGCGGC CCAAAAGGCG AATATTGTGT GCCTCAACGG CGAGGGGGGG
GAGATTCCCG ATATGTTGGG CCGATTTCGG GCCCACCGCG GTCAGCAGGT GGCTTCCGGC
CGTTTCGGGG TGTCCATGGA GTTACTCAAT TCTTCGGATT TTTTGGAAAT AAAGGTAGGT
CAGGGAGCCA AGCCCGGTGA AGGAGGGCAC CTGCCCGGCA ATAAAGTTTC GGACATGGTC
GCCCAGGCGC GGCACTGCCG TCCCGGCATA GATCTCATCT CCCCGTCCAA CCACCATGAC
ATCTATTCCA TCGAGGATCT GACACAGCTG ATAACCGAAC TCAAAACAGC CCAGCCCACC
GCGCGTGTTT CGGTCAAAAT CCCCGTCACC AGCGGAGTGG GGACCATTGC CGTCGGCGTG
GCCAAGGCTG GCGCCGACAT CATCAATCTG AGCGGATTCG AGGGCGGCAC GGGCGCGGCC
CGGGAACACG CCAAGAAATA TGTCGGGCTG CCCGTGGAGA TCGGTGTCGT CGAAGCGCAC
AATGCCCTGC TCGAAGCTGG GCTGCGGGAG CATGTCGAGC TCTGGTGCGA CGGCGGGCTG
CGCAGCGGCA AGGATATCCT GCGCATGGTG CTTTTGGGGG CCAATCGGGT CGGCCTCGGC
ACTGCCGCGC TGATGGCTAT CGGATGCATC AGTTGCCAGC GGTGTCACCT CGACCGCTGT
CCCAGGGGGA TTTCCACCCA ATTGCGCGAC GCGGCCCAGG CCAAGGCCAA AGGCGTCAAA
GGGTTCAGTC CTCTGGATCT CAAGGAAGAG ACGGAAAATC TTGCGCGACT GCTGCGAGCC
CTGGGTGAAG ATCTCAAGCG GCGGGTGGCC GATCTCGGCG CTCATCGGCT GCAGGACCTC
GTCGGGCGGC GGGATCTCTT GGTCCAAAAC CGCCTCAAGG AGACGGTGGA TACGGCCTCC
TTGCTCAAAT TGCCTGACAC TTCGGGCACG GAGGTCTGCA CCTATCCCCA TCTGGTCCGC
CGTCCCCTGA ATTTTTTGAC CAAGCTCATC GCTGATCTCA GCCTGGAGCG TTTCGCTGCC
GGCAGTGGCC TCGTCCAATT CGTCGACGAA GGTGTACACA GCACCGACCG GGCGGTGGGC
ACCTATCTTT CCGGAGCCAT GATCCGGGAA TACGGCATGC AGGAACACCG GCGGGCGCAA
TTGCGTCTGC AGGCCTCGGT TCCAGGAAAC GGCCTCTGCG CCTTCAATAT CCCGGCCATT
GATACGATTG TCTCCGGAGG GGCGCAGGAT GGCACTGGAA AGGGGAGCTT TGGCGGCAAG
GTAGCTGTAC TCAAGGGAAG CAACCTGCAG GGCAGCCGCG TGGACGGGTC GACCGGCAAG
AGCTTTGCCT ACGGGGCCAT TCACGGGCTG TTTTTTGTTC AGAATTATGC GGATTCCAGG
GCTTGTATCA GGCTCTCCGG AGCCGATGTC GTCTTTGGAG GGCGGATCAA AGGGCCCATA
AAGGAGGCGG GCAATATCGC CCCCTATGCC CATCTGAAGG GATTTGCCTT TGAATACATG
ACCGGCGGGC GGGTAGTCGT CCTTGGCGAC CCGGGCCCAT GGATCTGTGC CGGGATGACC
GGCGGGGTCG TCTACCAATG CCTGTATCCT GAGTGGGGAT TTGACCGCGA TGCCTTGCAG
CACCGCCTTT CCAAGGGAGC GTTTGTGGAT ATTGTCGATA TGGACGAGAC CGCTACGACT
GATGTGCGCG ATCTCCTTGC CGGCTATATT CAGGAACTTG AAGCGAGCTT TCAGGAGGCC
GAGGCCGAGG CTGTCCGGGC GCTGGCAGAC CGGGTCGTTG ACCGCTTTGT GGCCATCCGA
CCGCGGGGAT CGCGGGAAGT TGAGGCGGAG TAA
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| Protein sequence | MSIAERDACA IIALVNKQGQ ATHANIVRTI QALKHMAHRS GDINGEGDGC GITTDIPTAI
WGRHLESQGL SRHLAESRRF FVGHLLLPKD QARDVGDLQR RARDVFAQRD LEILVEKEDG
ARSAELGPRG QTEAPFFWQI AGLVPDGDRQ QARRTLFDLE LALEREVPAW APASLSVESV
VYKLRGAPDL LPRVYPELQD ESTRSVMTLG HSRYSTNTLP TVERSQPFSL LGHNGEINTI
ERLRSAARVL GIPPVPGGSD SQDLNRILEG LIHLQGFDPL EALEMVFPAV DSLVQRYDPE
LQNVYALYRW FFPPSAQGPA AVVARSGDVC MGSVDALGLR PLWFGESDYD WYLSSEKGVV
DLELTMSDPV PLAPGEKKAI VAGRGRPAEV KDYSAIQSEL AALLKRRQTL WESTRSLYTA
PIPLSEDHSG DKASEALPEE VPLAALRAFG WQHYDLDIRK QVVRTGRPVI GSMGHQAPLA
CLRQEALPTL AEFFKEEVAV VTNPAIDRER EGEHFSTRIL LGSRPDWRHL NDSSPVGLML
ETPVLLDRLV QDHLTQEEYK DLCRTSGTVA LEEVQAFFTA QGREQERFVS LDASFCPGTQ
SLQARLEGLT AEAIEAVDGG ASILVLDDQR CFERACAPVD PGLAVSTIGT ALEGQGRRRR
CGLVVRSGAV RNLHDLMFLL GLGADAVAPY LLWQVALQTR GTAIPAHEAV QRTMHVLQVG
MEKVMSTMGI HELCGYGRIF ASVGLGADVA AHFATANFCA GITGGLDFAA LERLARLRVE
AFNASSQERL HKDPPRNPKV GRLIRGAATG QLGYAELAKG LDALEEEHPT ALRHIWDVAP
LSAQPGKRLA MDEVDIGIGE HAMPVVIAAM SFGSQGENSF RAYARAAQKA NIVCLNGEGG
EIPDMLGRFR AHRGQQVASG RFGVSMELLN SSDFLEIKVG QGAKPGEGGH LPGNKVSDMV
AQARHCRPGI DLISPSNHHD IYSIEDLTQL ITELKTAQPT ARVSVKIPVT SGVGTIAVGV
AKAGADIINL SGFEGGTGAA REHAKKYVGL PVEIGVVEAH NALLEAGLRE HVELWCDGGL
RSGKDILRMV LLGANRVGLG TAALMAIGCI SCQRCHLDRC PRGISTQLRD AAQAKAKGVK
GFSPLDLKEE TENLARLLRA LGEDLKRRVA DLGAHRLQDL VGRRDLLVQN RLKETVDTAS
LLKLPDTSGT EVCTYPHLVR RPLNFLTKLI ADLSLERFAA GSGLVQFVDE GVHSTDRAVG
TYLSGAMIRE YGMQEHRRAQ LRLQASVPGN GLCAFNIPAI DTIVSGGAQD GTGKGSFGGK
VAVLKGSNLQ GSRVDGSTGK SFAYGAIHGL FFVQNYADSR ACIRLSGADV VFGGRIKGPI
KEAGNIAPYA HLKGFAFEYM TGGRVVVLGD PGPWICAGMT GGVVYQCLYP EWGFDRDALQ
HRLSKGAFVD IVDMDETATT DVRDLLAGYI QELEASFQEA EAEAVRALAD RVVDRFVAIR
PRGSREVEAE
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