| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dret_0101 |
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| Symbol | |
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| ID | 8417905 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Desulfohalobium retbaense DSM 5692 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013223 |
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| Strand | - |
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| Start bp | 136239 |
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| End bp | 137090 |
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| Gene Length | 852 bp |
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| Protein Length | 283 aa |
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| Translation table | 11 |
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| GC content | 58% |
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| IMG OID | 645036666 |
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| Product | Fe-S cluster assembly protein NifU |
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| Protein accession | YP_003196981 |
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| Protein GI | 258404239 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG0822] NifU homolog involved in Fe-S cluster formation |
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| TIGRFAM ID | [TIGR02000] Fe-S cluster assembly protein NifU |
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Plasmid Coverage information |
| Num covering plasmid clones | 38 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 24 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTGGGAAT ATACCGACGC GGTCAAAGAC CACTTCCTGC ACCCCAAAAA TGTCGGGGCC
ATGGAAAATC CCACGGCAGT GGGCGAAGTC GGCAGTCTGG CGTGCGGCGA CGCCCTCAAG
CTGTATCTGA AGATAAACGA CGACGGCATC ATTGAAGACG CGACATTCCA AACCTTTGGC
TGTGCCAGCG CCATTGCCTC CAGTTCTGTG CTCACTGAAC TGATCAAAGG CAAGACCATT
GAACAGGCCA AGTCGGTGAC CAACAAAGAA ATCGCCGACG CCCTCGGCGG CCTGCCCAAA
GAAAAGATGC ACTGCTCGGT CATGGGCCAG GAAGCCCTGG AAGCGGCCCT GAAGCACTAT
TGGGGCGAAG TCGTCCCCGA AGTGCCGCTG GAGGGCGAGA TCGTCTGCAC CTGTTTCGGG
GTCACCGACC AGCAGATCCT GCGGGCCATT GAGGAAAACG ATCTCAAAAC TGTCGAGGAC
ATCACCGCCT ACACCAAAGC CGGGGGCGGA TGCGGGGAAT GCCAGTCCAA GCTCACCGAG
TTGCTGGAGA ACAAACGTTT GAGCGAGCCC GCGCAAGTCC CCACCGGTCC CGCCGCTTCC
ACAAAAAAAT TGACCAACAT CCAGCGCATG CAATTGGTCA ATGACGTTAT CGAAAAAGAA
ATCCGGCCCA GCCTGCAAAA AGACGGCGGC GACATTGAAC TCATCGACAT CGAGGGCCGG
GAGGTTCAGG TCGCCCTGCG GGGGATGTGC TCGGGTTGTC CCTCCAGCCA GCTGACCTTG
AAAAACGTTG TCGAGCGCCG CCTGCAGGAA CGGGTCGAAC CTGAGATCAC CATCAAGGAG
ATTGTCGAAT GA
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| Protein sequence | MWEYTDAVKD HFLHPKNVGA MENPTAVGEV GSLACGDALK LYLKINDDGI IEDATFQTFG
CASAIASSSV LTELIKGKTI EQAKSVTNKE IADALGGLPK EKMHCSVMGQ EALEAALKHY
WGEVVPEVPL EGEIVCTCFG VTDQQILRAI EENDLKTVED ITAYTKAGGG CGECQSKLTE
LLENKRLSEP AQVPTGPAAS TKKLTNIQRM QLVNDVIEKE IRPSLQKDGG DIELIDIEGR
EVQVALRGMC SGCPSSQLTL KNVVERRLQE RVEPEITIKE IVE
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