| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dret_0016 |
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| Symbol | |
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| ID | 8417818 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Desulfohalobium retbaense DSM 5692 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013223 |
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| Strand | + |
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| Start bp | 17561 |
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| End bp | 18529 |
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| Gene Length | 969 bp |
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| Protein Length | 322 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 645036579 |
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| Product | methionyl-tRNA formyltransferase |
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| Protein accession | YP_003196896 |
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| Protein GI | 258404154 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0223] Methionyl-tRNA formyltransferase |
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| TIGRFAM ID | [TIGR00460] methionyl-tRNA formyltransferase |
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Plasmid Coverage information |
| Num covering plasmid clones | 25 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 38 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCAGAAA CAGGACTAAC CCCCCTGCGC ATCGTTTTTA TGGGCACGCC GGAATTCGCG
GCAGTGCCCC TTTCCGCGTT GGCGGCCTGG GACCAGGCCG AGATTGTCGG CGTCTACACC
CAACCCGACC GCCCCTGTGG CCGGGGCCGG GTCTGTCGGC CCTGTGCGGT AAAGGAAAAG
GCTCAGGAAC TCGGCATTCC AGTCTTTCAG CCGCAGGATT TCAAGAGCGA AGCCTCCAGG
GAAGAATTGC ACTCCCTCAA GCCGGATGTC CTCGTGGTCG CCGCCTACGG GTTGATCCTG
CCTCAAACGG TTCTGGATAT CGCTCCGATG GGAGCGGTGA ACATCCACGC CTCGCTGCTG
CCGAAATACC GGGGCGCCGC CCCGATCCAA CGGGCCCTGC TCCACGGCGA ACCGGTCACC
GGCATCACCA TCATGCAGAT GGAGGCCGGG TTGGACAGCG GCCCCATACT CTTGCAACGG
GCTCTTGGGG TCGGCGTCAA TGACACGGCG GCTGATCTCC ATGACGAATT GGCAGACCTC
GGGAGCCGAT TGGTCATCGA GGCCTTGGCC AAACTGCGCC AAGAGCGAAT TGCCCCCGTC
GAGCAGGATC CCAGTCTGGC GACCTATGCC CCCAAACTGG TCAAGACGGA AGGGGTTGTG
GACTGGAATC GACCCGCCCA GGAGGTCCAC AATCAGCTTC GGGCCCTGTA TCCCTGGCCG
GGGTCCTACT TTATCTGGCA CCCCCCTGAC GGCGGAGAAC CGATACGGTT GACCGTGTTT
CCCGGCGCCA TCGGCCGGGA AAAAAAGGAC ACGGAGACAC CGGGGCAGTT TCTGGGAATA
GAAGACGGCC ATCTGGCCCT GGCCTGCGTC GACAAGATTT ACCTTGTGCC GCGTATTCAG
CCTGCCGGTC GGAAAGCCCT GGACCCCAAA GGTTTTTTCT GCGGCTATCT CAGCCGCTGT
GCGGAATAG
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| Protein sequence | MAETGLTPLR IVFMGTPEFA AVPLSALAAW DQAEIVGVYT QPDRPCGRGR VCRPCAVKEK
AQELGIPVFQ PQDFKSEASR EELHSLKPDV LVVAAYGLIL PQTVLDIAPM GAVNIHASLL
PKYRGAAPIQ RALLHGEPVT GITIMQMEAG LDSGPILLQR ALGVGVNDTA ADLHDELADL
GSRLVIEALA KLRQERIAPV EQDPSLATYA PKLVKTEGVV DWNRPAQEVH NQLRALYPWP
GSYFIWHPPD GGEPIRLTVF PGAIGREKKD TETPGQFLGI EDGHLALACV DKIYLVPRIQ
PAGRKALDPK GFFCGYLSRC AE
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