Gene Dred_3233 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDred_3233 
Symbol 
ID4957475 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfotomaculum reducens MI-1 
KingdomBacteria 
Replicon accessionNC_009253 
Strand- 
Start bp3515687 
End bp3516334 
Gene Length648 bp 
Protein Length215 aa 
Translation table11 
GC content43% 
IMG OID640182421 
Productnitroreductase 
Protein accessionYP_001114560 
Protein GI134301064 
COG category[C] Energy production and conversion 
COG ID[COG0778] Nitroreductase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTTAAAAG AGATTGCCCA GTGGAAAAGT GTAAGAAAGT TTTCCTCGGA GCCTGTTACA 
AAGGATCAGC TCTTAAGCAT TATGCAAGCA GGGCGGAGAA GTCCTTCCTG GAAGAATATT 
CAGCCCTGGA GATTTATTGC AGTTACGGAT GAAAAAGATC GTACCAAGCT GGCCGAGGCA 
TTTTCTATGG GCGTCTTAAT AAAGAAAGCT CCGGCCGTTA TTATGTGCGT CGGGACACTT 
GAAGCTTGGG TAAAGGATCA TCAGCTTGCA CGGCTAAAAG AGCTGTTTGG TGCCACCGGG 
GTCAATATGG CCGATGAAGA TATTAAAAAG ATGTACCTGG ATCATGAATT AGCCCAATCC 
TTAGCTGGCA AGCCGGCATC CATTATGGCC CGCACCTTTG AGAACATAGG AATAGCCTAT 
GCTTTCATGA TTTTAGAAGC TATGCATCAA GGATTAGGTG CCTGTATTGT GGGTGAATTA 
GACAACGAAT TAGTAGCTGT CAATGATCAA AAATATGCCG AAATAAAATC CTATTTCAAT 
ATTTCTGAGA CAGAAGTCAT TACAGCGGCC ATTATTGTGG GTCATCCTGC CAAGGAAACA 
CCCATTATTC CCAGAAAACC GGAAAAAGAT GTGATCTTCT TTAAGTAA
 
Protein sequence
MLKEIAQWKS VRKFSSEPVT KDQLLSIMQA GRRSPSWKNI QPWRFIAVTD EKDRTKLAEA 
FSMGVLIKKA PAVIMCVGTL EAWVKDHQLA RLKELFGATG VNMADEDIKK MYLDHELAQS 
LAGKPASIMA RTFENIGIAY AFMILEAMHQ GLGACIVGEL DNELVAVNDQ KYAEIKSYFN 
ISETEVITAA IIVGHPAKET PIIPRKPEKD VIFFK