| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dred_3138 |
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| Symbol | |
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| ID | 4956955 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Desulfotomaculum reducens MI-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009253 |
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| Strand | - |
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| Start bp | 3416717 |
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| End bp | 3419002 |
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| Gene Length | 2286 bp |
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| Protein Length | 761 aa |
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| Translation table | 11 |
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| GC content | 35% |
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| IMG OID | 640182326 |
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| Product | O-antigen polymerase |
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| Protein accession | YP_001114465 |
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| Protein GI | 134300969 |
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| COG category | [N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG3063] Tfp pilus assembly protein PilF |
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| TIGRFAM ID | [TIGR01435] glutamate--cysteine ligase/gamma-glutamylcysteine synthetase, Streptococcus agalactiae type |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGGCTACA CAAGAACACC ATTACTAGGT AATGAGGTAA TACTAGAAAC AGAGAGTCTT
TTTGACCGTC TGACATATTG GGGACTTTGT TGCCTGTTAT TCATAGGTCC CTTTTTTAAT
GGGTTATTTT TTCCAGATAA TCAGCGAGTG GCATTACTAG CTGCAGCTAT CCTTTTTCTT
TTTGCTTCAA TAATTAGCTT TCAAAGGAAA AACGTACGTT TTTTTTCAAA TCCATTAGAT
TATTTAGTCT TAGCATTACC AGTTGTTTAT ATCATTGCTT CTTTTTCAGC TGTTAACTAT
GCTTTGGCTA TTGATGAAGT ATTTGAAAAT ATCTTGTATT TTTTTGTCTT TTGGACCGCT
GTTCGTGTAA TTCGCACATC TAAACATATA GAAAAAATTT TTGCTGTTTT ATTCTTTAAC
GGAGTGTGTG TAGCATTAGC AGGCTTGTTT GTTGCTTCAG GTTGGTTAGA TATAAAGGAT
GCATATTCTC TACGCGATGG AGGTACCATT GCTTCAGTCT TTCAATATAA AAATACTTTA
GCATCCTTCT TGACTGCAAT TATTTTTATT GGCTTTTATC TCACGGAGGA ATACAAAAAT
AAACTAACTA ATTATTTTTT TAGCTCCAGT ACATATCTTC TGTTATTGGT ATTTTTCTCA
ACTCAATCCC ATGGTGGCTA TATCATATTT GGTATTTTTT CTTCACTTTT ATGGCTTCTT
TATCCAGACA ATAAAAGATT TATCCTAATC CTTAGTAACA TATTATTAGC TCTATTTGCC
TTCTTAGGCA GCAAGATGTT TCTTTTAAGT ATAATGAATA AGAATGTTTT TCAGGCATGG
CTTTGGGTGA TGACTGGTAT AATAATTACT TCCCTTTACC AGTGGATTAT TAATAAATAT
AAATCAAAAG CACCCCATAT CTCATTGAAA CAAATACTTA TTTTTTTGCT AGGTATGCTC
CTAGGGGGGA CATTTGCTTT ATACCATACA GGGATTTTTG ATATTCTTTT AGAAAAAATA
CATATGTTTG GAGCTATGGA ACGTTTCACA ACGTACGAAG ATAGTTTCAA AATGATTCAG
GAAAGACCAT TCATTGGGTG GGGCGGCGGA GGTTGGGCAG AAGCCTATAC AATATTCCAG
AGCTATGCTT ATAATGTACG CGTAATGCAC AGTTATTTTT TGCAAGCAAC CATCGAAGCA
GGTCTCTTGG GTTTGCTTAT AATAATTGCC ATCTGGGGGA TGTTTATAAA ACTTGCTTAT
AGAGTATTTA AATTCTCCCG CACGGAAGAA AAATTGATGG CAGCCACTTT AATTTGTGCG
ATCTTAGCAA TTTTGTCCCA CTCAGTAATA GATTTTAATT TATCCTTAGC TGCGTTAACG
ATGATCCTTT TTACCTTAGT AGGGTGCATG GTAAGATTGG ACCAGAACTT TAGCCAGGAA
AGCCCAAAAG AAAAGGGAAA GCTGTACTCA GGATACACAT TAGTGGCCTC TATTATTGTT
ACATTGGTCA TCTTTACAGG ATCTTTAATA ATGATTTCTT CCGATAACCT CTATGATGCT
GCTATAAAAG CACTTAATGC AAGACAAGGG CAGGAGGCCA TAGCTTTAAC GGAAAAGGCT
ATAACAATGA ACCCAATGGA AGCTAAGACA TATGGCCTTG CAGCCCAATT ATATAGTGCC
TTTAAAATGC CTAAGCAAGC TGTAGAAAAC GCTGACAAGG CAATAGAGTT AGCCCCCTAC
AATCCAGATA GATATCTGGA GGCAGCTGTT ATATACGTAC GAGCAGGTGA AACTGAGAAG
GCCGTAACGA CTGCTGAAAG GGCCATTCAA TTAGCACCCT TAAAAGTTAA GTATTATGAA
CAATATTCAG ATACACTGAT AAATGTAGCC TTAAGAGAAT TGCAAAATAA GCAACCCAAA
ACTGTGGCTA ATTATACCAA AGAAACAATA GCTATACCGG ATAAAATAAC AGCTGTGCTT
AAAAAAATAA GTCCAGAAAA GAAAAAACTT TGGATTTATG CACAACCACT TGCAGTAACT
GACAAAATAA AACTAAACAT AGGTATTGCT AATTTGATTC AAGGGAACCT AGTTCAAGCA
GCCCAAAACA TTAATGAAGC TTCCCAGAAT CCTCAGATTA ATAAAGATTC CCTTGTTTGG
CAAGCATTAA TTGCTCAGAA GCAGGGTGAT ATCAGCAAAG CGGAAAACCT TTTAAAATCT
GCAGAAAAAG AAAATCCAAA TATTAAAAAA CAGTATAATC AACTTTTATC GTTAATTGCC
AGTTAA
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| Protein sequence | MGYTRTPLLG NEVILETESL FDRLTYWGLC CLLFIGPFFN GLFFPDNQRV ALLAAAILFL
FASIISFQRK NVRFFSNPLD YLVLALPVVY IIASFSAVNY ALAIDEVFEN ILYFFVFWTA
VRVIRTSKHI EKIFAVLFFN GVCVALAGLF VASGWLDIKD AYSLRDGGTI ASVFQYKNTL
ASFLTAIIFI GFYLTEEYKN KLTNYFFSSS TYLLLLVFFS TQSHGGYIIF GIFSSLLWLL
YPDNKRFILI LSNILLALFA FLGSKMFLLS IMNKNVFQAW LWVMTGIIIT SLYQWIINKY
KSKAPHISLK QILIFLLGML LGGTFALYHT GIFDILLEKI HMFGAMERFT TYEDSFKMIQ
ERPFIGWGGG GWAEAYTIFQ SYAYNVRVMH SYFLQATIEA GLLGLLIIIA IWGMFIKLAY
RVFKFSRTEE KLMAATLICA ILAILSHSVI DFNLSLAALT MILFTLVGCM VRLDQNFSQE
SPKEKGKLYS GYTLVASIIV TLVIFTGSLI MISSDNLYDA AIKALNARQG QEAIALTEKA
ITMNPMEAKT YGLAAQLYSA FKMPKQAVEN ADKAIELAPY NPDRYLEAAV IYVRAGETEK
AVTTAERAIQ LAPLKVKYYE QYSDTLINVA LRELQNKQPK TVANYTKETI AIPDKITAVL
KKISPEKKKL WIYAQPLAVT DKIKLNIGIA NLIQGNLVQA AQNINEASQN PQINKDSLVW
QALIAQKQGD ISKAENLLKS AEKENPNIKK QYNQLLSLIA S
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