Gene Dred_2435 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDred_2435 
Symbol 
ID4958513 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfotomaculum reducens MI-1 
KingdomBacteria 
Replicon accessionNC_009253 
Strand
Start bp2650730 
End bp2652046 
Gene Length1317 bp 
Protein Length438 aa 
Translation table11 
GC content45% 
IMG OID640181607 
Productflagellar hook-associated protein 3 
Protein accessionYP_001113770 
Protein GI134300274 
COG category[N] Cell motility 
COG ID[COG1344] Flagellin and related hook-associated proteins 
TIGRFAM ID[TIGR02550] flagellar hook-associated protein 3 


Plasmid Coverage information

Num covering plasmid clones31 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGTTACGAG TATCTACAAG TCTTTTAGGT AATAACCTGC GCAACTATAT ACAAAACAAT 
TTACAGAGAG CTGCCAAGTA TCAAGAGCAA TCTTCCACTG GTAAAACTAT TAACAGGCCA
TCAGATAGCC CCAGCCAAAT AAGTTATCTG ATGTCCGTCA ATGCTACTTT GATCAGCAAC
GAGCAATATT CCCGTAACAT TAAGGACGGT TTGGCCTACC TGAACCAGAG CGACTCGGCC
CTGGATACAA TGGGGAAGCT TCTGCAGGAT GCAAAGGTAG AGGCTAATAA GGGTGCCAAC
GGTACTTTAA CACCGGAAGA TCGGAATGCC ATTGCCGAGC AAATTGATCG GCAAATCGAC
GCCATGGTGG ATATGGCTAA CAGTGCCTTA GGGGGCAAAT ATTTATTTGC CGGTCGGAAA
AACGGTCAAC CACCCTTCTA TCGGGACCCT GACAGCGGCG AAATCTATTA CCGGGGAGAT
ACCAACCTGG TCAGTCGGGA AATTATTTTT GGTTACAGCT ATGAGGTAGT TGCTGCCGGG
GTAGCGGATA ATTACATTAC CGGCACTGTG GACCTCAGCC AGGGCAAAGT GCTAAAGGCC
GAGGACATGA CCTTTAAAGT GGCCTTAGAT GAGAATAACG TTAAAGAAAT TGATTTAAGC
GGTTATATAT CACCGGGCTT CCGTAAGTTT GATGATATAA AAAATGCCAT GCAGCAGGCC
TTAGATGATA ACTTTGGTAC ACAAACCATC GCTGTCGATG ATGATGGCAA AGGTCATATT
GTACTACAAG CTAATAACGA CGCCACGGCC TTTAAAGTGC TATCCAGTGA TCCACTGGAC
AGCACCAAAC AGGGGCATAC CACTTTCTTT GGCGGCGAAC GCAGTGTTAT AAACGGGGTC
TTTGGTAAAT TAGCCAGCTC CACAAATCCT GCCAATCAGC TGGATGACCC CATGAACCCC
GGGCAAAAAA TGACCAAAGT TGTAGGCGGA CCCTTTGAGG TTCTTAGTAA GTTAGTGACG
AATTTAAGAA ACAATGATTC CCAAGCAGTA ACTGATTCCC TAAAAGACTT GGAAAATGCC
CATGACGATA TGCTGAAGCA ACGTGTCGGA GTAGGGGCCA GAACCCGCCA CCTGGAGGCA
GTGCAGGATC AATTGGATGA CCAGGAAATT AAATTGAAAA GTATTCTAGT TGATGTTCAA
GGGGCTGATA TTACCAAATT AACCATTGAA GTGGCCCAGA ACCAGCTTGT ACACCAGGCA
TCCTTAATGA CAGCCTCCAA TCTACTGAAT ACCAGCCTAT TACAATACTT AAAATAA
 
Protein sequence
MLRVSTSLLG NNLRNYIQNN LQRAAKYQEQ SSTGKTINRP SDSPSQISYL MSVNATLISN 
EQYSRNIKDG LAYLNQSDSA LDTMGKLLQD AKVEANKGAN GTLTPEDRNA IAEQIDRQID
AMVDMANSAL GGKYLFAGRK NGQPPFYRDP DSGEIYYRGD TNLVSREIIF GYSYEVVAAG
VADNYITGTV DLSQGKVLKA EDMTFKVALD ENNVKEIDLS GYISPGFRKF DDIKNAMQQA
LDDNFGTQTI AVDDDGKGHI VLQANNDATA FKVLSSDPLD STKQGHTTFF GGERSVINGV
FGKLASSTNP ANQLDDPMNP GQKMTKVVGG PFEVLSKLVT NLRNNDSQAV TDSLKDLENA
HDDMLKQRVG VGARTRHLEA VQDQLDDQEI KLKSILVDVQ GADITKLTIE VAQNQLVHQA
SLMTASNLLN TSLLQYLK