| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dred_2375 |
|---|
| Symbol | guaA |
|---|
| ID | 4956663 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Desulfotomaculum reducens MI-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009253 |
|---|
| Strand | - |
|---|
| Start bp | 2599846 |
|---|
| End bp | 2601387 |
|---|
| Gene Length | 1542 bp |
|---|
| Protein Length | 513 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 48% |
|---|
| IMG OID | 640181547 |
|---|
| Product | GMP synthase |
|---|
| Protein accession | YP_001113710 |
|---|
| Protein GI | 134300214 |
|---|
| COG category | [F] Nucleotide transport and metabolism |
|---|
| COG ID | [COG0518] GMP synthase - Glutamine amidotransferase domain
[COG0519] GMP synthase, PP-ATPase domain/subunit |
|---|
| TIGRFAM ID | [TIGR00884] GMP synthase (glutamine-hydrolyzing), C-terminal domain or B subunit
[TIGR00888] GMP synthase (glutamine-hydrolyzing), N-terminal domain or A subunit |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 7 |
|---|
| Plasmid unclonability p-value | 0.0414714 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGTCCTTGG CAGAACAAGA ATTAATTCTA GTTCTTGATT TTGGTGGCCA ATATACCCAA
CTGATTGCCC GTCGTATTCG GGATGTCAAT GTGTATTGCG AAATTGAGCC CCATAATGTA
TCAATCGATA AAATAAAGGC AAAAAATCCT AAGGGTATCA TATTTTCAGG TGGACCCTCC
AGTGTTTACG GTGAAAAAGC TCCCACCGTT GATCCGGCAG TTTACGAACT GGATATACCA
GTACTGGGGA TCTGCTACGG TATGCAGCTA ATGACTCAAC AGTTAAAGGG TAAAGTGGTG
CCCGCCGAGA TGCGTGAATA TGGGCGTACC ACATTAAGGG TTATGCAGTG TGACAATATC
CTGAAGAACC TGACAGCTGA TGAAGAATGC TGGATGAGCC ATGGCGACCG GGTTGAGGAA
GTTCCTCCGG GTTTTCAGGT GCTTGCCCAA ACCGAAAAGG CTCCGGTGGC TGCCATGGCA
AACCCCGAAA AAAAACTTTT TGCAGTGCAA TTCCACCCAG AAGTGATCCA TACCCCAAAG
GGTATGGAAG TTTTAAAGAG CTTTCTTTTT GATATCTGCG GCTGTAGTGG TTCATGGAGT
ATGGGTTCCT TCTTGGACGA AGCCGTTAAA GAGGTTAAAC AAAGGGTCGG TAATCGTCAG
GTTCTTTGTG CCCTGAGCGG TGGCGTCGAC TCTTCTGTGG CTGCGGTTTT GGTGCACCGG
GCAGTAGGTG ATAACTTAAC CTGTGTCTTT GTTGATCACG GTCTGTTGCG GAAAAACGAA
GCTGAACAGG TTGTTAAGAC CTTCCGGGAT CAGTTTAATA TTAAGCTGGT TCATGTGGAT
GCTTCGGAAC GCTTCTTAGG AAAACTGCAG GGTGTAACCG ATCCAGAACA AAAACGTAAA
ATTATTGGCA CTGAGTTCAT CCGTGTCTTT GAAGAAGAGG CCAGAAAACT GGGTGAAATT
GATTTTCTTG TACAGGGAAC CCTGTATCCG GACGTTGTTG AGAGCGGTAC CGCCACCGCG
GAAGTTATTA AATCCCATCA TAATGTAGGC GGCCTGCCGG AAGATATGAA GTTTGATCTG
GTAGAACCTT TACGTTGGCT TTTTAAAGAC GAAGTTCGCC GCTTGGGTGA GGAATTGGGA
ATGCCTGAGG AGATTGTCTG GCGTCAACCC TTCCCTGGTC CGGGACTGGC CGTTCGTATC
CTAGGGGAAA TCACCAAACC AAAGCTGGCC ATTCTGCGTG AAGCTGATTT CGTGGTAACC
GATGAAATTA AGAACGCCGG TTTAAACCGG GAAATTTGGC AGTATTTTGC TGTCTTGCCA
GACATGCGCA GTGTGGGTGT CATGGGCGAT GGCCGTACCT ATGCTTATGC AATTGTGGTA
CGGGCTGTTT ACAGCCATGA CGGCATGACA GCAGACTGGG CGAAGATTCC CCACGATGTG
CTGGGTAATA TCTCCACCCG TTTGGTGAAT GAGGTGGCAG AGATCAATAG GGTTGTTTAC
GACATCACCT CCAAGCCCCC AGGTACCATT GAGTGGGAGT AG
|
|---|
| Protein sequence | MSLAEQELIL VLDFGGQYTQ LIARRIRDVN VYCEIEPHNV SIDKIKAKNP KGIIFSGGPS
SVYGEKAPTV DPAVYELDIP VLGICYGMQL MTQQLKGKVV PAEMREYGRT TLRVMQCDNI
LKNLTADEEC WMSHGDRVEE VPPGFQVLAQ TEKAPVAAMA NPEKKLFAVQ FHPEVIHTPK
GMEVLKSFLF DICGCSGSWS MGSFLDEAVK EVKQRVGNRQ VLCALSGGVD SSVAAVLVHR
AVGDNLTCVF VDHGLLRKNE AEQVVKTFRD QFNIKLVHVD ASERFLGKLQ GVTDPEQKRK
IIGTEFIRVF EEEARKLGEI DFLVQGTLYP DVVESGTATA EVIKSHHNVG GLPEDMKFDL
VEPLRWLFKD EVRRLGEELG MPEEIVWRQP FPGPGLAVRI LGEITKPKLA ILREADFVVT
DEIKNAGLNR EIWQYFAVLP DMRSVGVMGD GRTYAYAIVV RAVYSHDGMT ADWAKIPHDV
LGNISTRLVN EVAEINRVVY DITSKPPGTI EWE
|
|---|
| |