Gene Dred_2345 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDred_2345 
Symbol 
ID4956733 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfotomaculum reducens MI-1 
KingdomBacteria 
Replicon accessionNC_009253 
Strand
Start bp2563652 
End bp2564824 
Gene Length1173 bp 
Protein Length390 aa 
Translation table11 
GC content43% 
IMG OID640181517 
ProductPyrrolo-quinoline quinone 
Protein accessionYP_001113680 
Protein GI134300184 
COG category[S] Function unknown 
COG ID[COG1520] FOG: WD40-like repeat 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
TTGAAAAAGC TTAATGTAAT ACTTCTTATG ATTTTGGCAT TTTTTACTGT GATTTTCCAG 
GCTGAGGCAG CTGGGCGGCT TTATCCCTAT GGAGAAGTAA AATGGATGGT GGAGAAAGCC
GGTAAATTAT CGGCGGATGT TACTATAACC GATAATGGTC TCCTGTATTG TCCGGCGGGT
AATAAAATCA TCTGTTATGA TTTAAGCAAA GGTACTAAGC TTTGGGAAAG AAAAATGGAT
ATGGGGGGCA AGATCACGCA ACCACTGTTG GTACAAAATC AGATCATTTA TGCCACTGGA
ACCGAAGGAA TTCAACAAAT GAGACCCAAT GGCAGTGTAA CCTGGCTTTA CCGTCTGCTA
CCCAAAGCCA AAGGAAGCAA AAGCAGCGCA GCGGTTTCTG CAGGGCCTAA TAATTTAATC
TATCTGGGGG TTGCTGACGG ACTCTATGCC CTGGAACCAC TAAAAAGTCA TAAGTGGCGC
TATTCCGATG AAAAAAATAT TCTTGCTTTG CAGGGGAACG AACAGGCAGT TTATGTTTGT
CTGGGAGACA AAGACAAAGG TTATAGCCTA CAGGCCATTG ATAAACAGGG GGCAAAACTT
TGGCAGGAGA GTCTTGGAAC CATCAAGAAT ATTCACATGA CCTTTGGATC GGAGGGTAAT
CTCATTGTTG TAACCAATCC TGCCGCCCTG GATCGAAATA CATCGGCTAA AATCCGCTGT
TATGATCCGA AAAAAGGACG AGAGGAATGG TCCTATTCAG TTAAAACTCA AGATATAACA
GATATTTCCT TTTCCAATGA CAATACCATC TTTTTTTGTG GCAATAGCAG GCTATATTGT
CTTAATGGGG ATAACGGTCA ATTAAAATGG GATATTCCCC TACTGAATGT TGCTTCCGGA
GTGGCTGTTG ATCCCTCCAA AAAGCGTATT TATGCAGGAA GCACAGATGG CAGAATTTTT
TGTGTTAGTT TTGCCGGTCG CTTGCTTTGG GACAAAGAGA TTGATAAAAC TACCGGTCAG
ACCTTAGCCA AGGGAGGTGG CATTATGGTT GACACCGGGA AGGATGAAAA GGATACCATT
ACCAGGGCAC CTATTTTATT GAAGGACGGC AGTATCCTTA TTTATACGGA CAAGGGTACT
ATGTATCGGT TTGTGGATGT ATTTAAGGGG TGA
 
Protein sequence
MKKLNVILLM ILAFFTVIFQ AEAAGRLYPY GEVKWMVEKA GKLSADVTIT DNGLLYCPAG 
NKIICYDLSK GTKLWERKMD MGGKITQPLL VQNQIIYATG TEGIQQMRPN GSVTWLYRLL
PKAKGSKSSA AVSAGPNNLI YLGVADGLYA LEPLKSHKWR YSDEKNILAL QGNEQAVYVC
LGDKDKGYSL QAIDKQGAKL WQESLGTIKN IHMTFGSEGN LIVVTNPAAL DRNTSAKIRC
YDPKKGREEW SYSVKTQDIT DISFSNDNTI FFCGNSRLYC LNGDNGQLKW DIPLLNVASG
VAVDPSKKRI YAGSTDGRIF CVSFAGRLLW DKEIDKTTGQ TLAKGGGIMV DTGKDEKDTI
TRAPILLKDG SILIYTDKGT MYRFVDVFKG