Gene Dred_2331 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDred_2331 
Symbol 
ID4957376 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfotomaculum reducens MI-1 
KingdomBacteria 
Replicon accessionNC_009253 
Strand+ 
Start bp2548167 
End bp2548802 
Gene Length636 bp 
Protein Length211 aa 
Translation table11 
GC content48% 
IMG OID640181503 
Productendonuclease III 
Protein accessionYP_001113666 
Protein GI134300170 
COG category[L] Replication, recombination and repair 
COG ID[COG0177] Predicted EndoIII-related endonuclease 
TIGRFAM ID[TIGR01083] endonuclease III 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGAAGATA GGATACAGCA GATTCTAACC CGGCTGGCAG AGACTTATCC CAATGCCACC 
ACAGATTTAA AATACACCAC ACCCTTCGAG TTGCTGGTGG CTGTCATTTT ATCTGCCCAG 
AGTACCGATG CTCAGGTTAA TAAAATTACC GAAAAGTTGT TTCAGAAATA TAATACTGCG 
GCTTCCTTTG CCCAGTTGAC CCCGGCGGAA GTGGCTGAAC ACATTAAGGG TTGCGGTCTC 
TTCCGGAATA AAAGTAAATT TCTTGTGGAA ACCAGCCGTA TACTAGTTGA AAAATACAAC 
GGCCAAGTTC CCCAAGCCAG GGAAGAATTA GAGAAACTGC CCGGTGTGGG CAGGAAAACT 
GCCAATGTTG TTTTGGGAGT TGCCTTCGGA CAAAACACCT TTCCAGTGGA TACACATGTG 
CACCGACTGG CCCACCGCTT GGGTCTGGCT TCCGGTAAAA CACCGGAACA AGTTGAAAAG 
GAATTATGCC AGATCATGCC GCCGGAATTG TGGCAACCCT GCCATCACTG GATTATTCAG 
CACGGTAGAA GGATTTGCGA TGCCCGCAAC CCCCGCTGTG GCCAATGCTG TTTAATAGAT 
CTTTGCCCGG AGGCCCTTAA GAAAGGGGAG TTTTAG
 
Protein sequence
MEDRIQQILT RLAETYPNAT TDLKYTTPFE LLVAVILSAQ STDAQVNKIT EKLFQKYNTA 
ASFAQLTPAE VAEHIKGCGL FRNKSKFLVE TSRILVEKYN GQVPQAREEL EKLPGVGRKT 
ANVVLGVAFG QNTFPVDTHV HRLAHRLGLA SGKTPEQVEK ELCQIMPPEL WQPCHHWIIQ 
HGRRICDARN PRCGQCCLID LCPEALKKGE F