| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dred_2279 |
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| Symbol | |
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| ID | 4955823 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Desulfotomaculum reducens MI-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009253 |
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| Strand | + |
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| Start bp | 2493004 |
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| End bp | 2494407 |
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| Gene Length | 1404 bp |
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| Protein Length | 467 aa |
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| Translation table | 11 |
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| GC content | 41% |
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| IMG OID | 640181450 |
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| Product | diguanylate cyclase |
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| Protein accession | YP_001113614 |
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| Protein GI | 134300118 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG2199] FOG: GGDEF domain |
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| TIGRFAM ID | [TIGR00254] diguanylate cyclase (GGDEF) domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGGATTAT CAGATCATAC ATTGAAAAAA TTGCGCATGG CTAATTTACG TCTGAAGCTA
ATTATAATCT CCCTTATCTG CCTTGCACTT TACATGGGGG TAACCTTGCT TGGCTTCAAT
CACAGTTACT CATCGGCTAT GTTCCTTACT ATTCACACCA ATATTGAATT TTTCTGTGTA
TTTGTCGCTT TAGGTACTTT TACAGTAACC TGGTACTCTT ACTTAAATAA CTGTTCTTTT
TATAGTTATT TTATTGGTCT AGGACTTTTA GCTGTGGGAT TTATTGATTT ATTTCATTTT
TACTCCTATG AAGGGATGCC ACATATTTTT GCCAATGCCT GTGCAAATCA TGCAACCCAG
TACCATGTCA TCGGCAGGAT CTTAATGGCA CTAACATTCT TGACCAGTAT ATTCTTTTAT
AAAAAAGAAA TTTGCTTCGT TAAACGTCAC TGCCGCTTTT ATTTACTGAT GGCAACCATG
TCATTGGTGA TATTTGTGCT GGTTACTGTA TCTTTTAATT CCTCCCTCTA CCCGGTGATG
TATGTAAAGG ATGTAGGGCT TACACAGGCC AAGGTATTTA TTGAATATGC TATCATTGCA
CTCTTGGTGG CTGCTGTACT GGGCTATCTC CGTTTATACC GTCAGCACAT GGACACTTAT
CTGCAGCTTA TTATTAGCAC ACTTACCATC TCTATCTTTA GTGAATTGTG CTTTATTTCC
TACGGGGATG TCTATGACAC ATTAAATTTA TTGGGTCATT TATTCCGCTT TGCTTCTTAT
GTTCTAATTT ACGTGGCCAT CTTTTTAAAT AATGTCAAGA AACCCTATCT GCAATTGGTG
GCTACCAGAT CTGCATTGGA AAATGCTAAC AACGCTCTGG AGGAGAAGGT CCAAGAAAGA
ACCAGGGAAT TACAAGAGGC CAATGATCGG TTAGTCCAAG CTGTTACTCA TGATTTTCTA
ACCGGCGCCA TTAACCGACT GGAATTTACC AACCGCTTTA ACCAATTGAA AGATATGGCT
ACTGAAGGTA CAGTGCATTC TGTTATTGCC CTTGATTTTG ATTCCTTTAA AAATATTAAT
GATACCTACG GCCATGGCGT GGGGGATGAA TGTTTGAAAA CCTTTGTTCA AGTAACGCAG
GAAGTGATTC GTCCCACCGA TTCTGTGGCT CGTTTCGGGG GTGATGAGTT TATGTTGTTG
CTGCCAGATA CCCCCAGAGA AGGAGCCAGG ATAGTTGGCG AAAAAATCAG AAACCACCTG
GCAAAAATAG CAAACCCACC CTTTACCGTC TCAATGGGCA TAGCCCAGTG GCCCAACGAT
GGACGCAAGG AAAAAGATCT ACTGGCCCAC GCCGACGAAG CCCTTTATGT GGCGAAAGAA
AAGGGGAAAA ATCAGACTGT ATAA
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| Protein sequence | MGLSDHTLKK LRMANLRLKL IIISLICLAL YMGVTLLGFN HSYSSAMFLT IHTNIEFFCV
FVALGTFTVT WYSYLNNCSF YSYFIGLGLL AVGFIDLFHF YSYEGMPHIF ANACANHATQ
YHVIGRILMA LTFLTSIFFY KKEICFVKRH CRFYLLMATM SLVIFVLVTV SFNSSLYPVM
YVKDVGLTQA KVFIEYAIIA LLVAAVLGYL RLYRQHMDTY LQLIISTLTI SIFSELCFIS
YGDVYDTLNL LGHLFRFASY VLIYVAIFLN NVKKPYLQLV ATRSALENAN NALEEKVQER
TRELQEANDR LVQAVTHDFL TGAINRLEFT NRFNQLKDMA TEGTVHSVIA LDFDSFKNIN
DTYGHGVGDE CLKTFVQVTQ EVIRPTDSVA RFGGDEFMLL LPDTPREGAR IVGEKIRNHL
AKIANPPFTV SMGIAQWPND GRKEKDLLAH ADEALYVAKE KGKNQTV
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