| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dred_2194 |
|---|
| Symbol | |
|---|
| ID | 4958578 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Desulfotomaculum reducens MI-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009253 |
|---|
| Strand | - |
|---|
| Start bp | 2399359 |
|---|
| End bp | 2400213 |
|---|
| Gene Length | 855 bp |
|---|
| Protein Length | 284 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 41% |
|---|
| IMG OID | 640181370 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_001113534 |
|---|
| Protein GI | 134300038 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG1427] Predicted periplasmic solute-binding protein |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 25 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | GTGGGCAAAA TACGGTTTGG GCAGGTAGAT TACCTAAATA CGTTGCCAGT CTTTCATGCT
TTAGAAGATG GCCTCCTGCC CTTTGATGGA GAATTAATCA AAGGACCACC CACCATGTTG
AATAAAATGT TTATGGAAGA TCAATTGGAA GTTGCATCTA TTTCTTCTGT TGAATATGCT
AGAAATATTG ATAAGTGCAT TATTCTCCCT AATTTGTCCG TCAGTGCTGA TGGACCGGTT
CAAAGTATTT TATTGTTTAG CCGGGCCCCG ATAGTGGAAT TGGAAGGCAG GAAAATCTGC
CTAACTTCTT CCTCGGCAAC CTCTGTTGCT TTATTAAAAG TACTTTTCCA ACATTATTAC
CATTTAGAGG TTGAATATGT CACCCAAAAA CCTGATTTAG ACAGCATGAT GGCAGAAGGA
GACGGTGCCT TACTCATTGG TGATGATGCC ATGCGAGCTC ATTTAAGAGT AAAACAGGAG
AAATTAGCCT ATCATGTAAC GGACCTTGGA GAAGCTTGGA AACAATTTAC TGGTGAACGT
ATGGTATACG CCCTTTGGGT TATCCGTAAG GAATTTGCCA AAGAAAACCC GGAAGTGGTT
AATAACCTTT GTCATCAACT GGTGGAAGCT AAAAAACTTG CTGACCAGAG CCTGTCGGCA
GTGTTAGAAA AAGGTCGTCG TAGAAGCGGG CTGCCGATGG AGATTTTAGA AGAATATTTT
AATACAATTA ATAACGCGTT TGCAGAGGAC CATCGAAGGG CTTTATTAAC CTTTTATGAT
TACTGTTACA AGAGCGGCCT TATTGAGGAG AGAGTACGAT TGGCAATATG GGGTGAAGAA
AATGTTGCAG GTTAA
|
|---|
| Protein sequence | MGKIRFGQVD YLNTLPVFHA LEDGLLPFDG ELIKGPPTML NKMFMEDQLE VASISSVEYA
RNIDKCIILP NLSVSADGPV QSILLFSRAP IVELEGRKIC LTSSSATSVA LLKVLFQHYY
HLEVEYVTQK PDLDSMMAEG DGALLIGDDA MRAHLRVKQE KLAYHVTDLG EAWKQFTGER
MVYALWVIRK EFAKENPEVV NNLCHQLVEA KKLADQSLSA VLEKGRRRSG LPMEILEEYF
NTINNAFAED HRRALLTFYD YCYKSGLIEE RVRLAIWGEE NVAG
|
|---|
| |