Gene Dred_2004 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDred_2004 
Symbol 
ID4956822 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfotomaculum reducens MI-1 
KingdomBacteria 
Replicon accessionNC_009253 
Strand
Start bp2202581 
End bp2203993 
Gene Length1413 bp 
Protein Length470 aa 
Translation table11 
GC content39% 
IMG OID640181171 
ProductSpoVR family protein 
Protein accessionYP_001113347 
Protein GI134299851 
COG category[S] Function unknown 
COG ID[COG2719] Uncharacterized conserved protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAGAGATC AAATCAACGA GGAGTTACGT CAATTAGAAG AGAGTATTCC GAAAATAATT 
AAAATTGCTC AGGATTTTAA GTTGGATTTT TACCCGATGC GATTTGAAAT ATGCCCTGGG
GAAATCATCT ACACCTTTGG TGCCTATGGC ATGCCCACTC GTTTTACACA CTGGTCCTTT
GGGAAATCAT ATCACAGGAT GAAAACACAG TATGATTATA ATTTAAGCAG AATCTATGAA
ATGGTTATTA ATTCAGATCC TTGCTATGCA TTTCTGTTGG AGGGTAATAC CATCATTCAA
AACAAAATGG TGGCAGCACA TGTACTAGCC CACTGTGACT TTTTTAAAAA TAATATTTAC
TTTAGCCATA CAAACCCGAA GGATATCATT GAGTCCATGG CTGTAGCTGC AGAAAGATTT
CGCCAATATG AAATGATTTA CGGACAGCAA AAAGTAGAGG CTTTTATTGA CTCAGTTTTA
TCGATCCAGG AGCACATAGA TCCCCATAGA ATGATAAAAC GAAAAGAGCA TTGCATAAAC
AAAACGAAAA ACTGTTGTGG CAAAAAACAG GACGCAACCT ATGACGACCT TTGGAAGTTA
GATCAGCCAG AACATTCTTG TCAATGCCAG GGTGATTGCT CAAAGAACAA GCAGACCAAA
TTACCCGAAC AACCGGAAAA GGACCTTCTC TTGTTTATTA TGGAAAATGC CAGGGATTTG
GAAGAATGGC AATTGGATAT ATTATCAACG ATGAGAGATG AAATGCTTTA TTTCTGGCCA
CAAATGCAAA CAAAAATCAT GAATGAGGGA TGGGCCTCTT ACTGGCATCT AAGAATAATG
AGGGAAATGG AAATTAATGA GGCCGAAGCT ATTGAATTTG CGAAGATGCA TGCCGGCGTA
GTTCTACCCT CCCGCAACAG CATTAACCCC TATTACCTCG GATTGAAAAT GTTGGAAGAT
ATTGAAAAAC GCTGGGATAA AGAGTATGGA GAAGGGGCCG GCAGAGAAAA GTTGTTTGAA
ATAAGAGAGA TGGACAACGA TATTTCTTTC CTGCGAAATT ACTTAACGAA AGAGTTAGTT
GAGGAACTGG ATTTGTACCT CTATCGGAAG ATTGGCCATG AGTGGAAAAT AGTGGAGAAA
AACTGGGAAA AAGTGAGGGA CCATCTGGTC TATAGTATGA CCAATTCTGG ATTTCCGGTT
ATTATGGTGG AAAATGGGGA CTATGAACAA CGGGGTGAAC TTTATCTTAA GCATGCTTTT
GAAGACCGGG AGTTGGATAT TAAATATCTA GAAAAGACAC TGGTGCATAT CTTTAATCTT
TGGAATCGAC CAGTTTACAT TGAAACTGAA ATTGACAATA AAGCTGCTTT ATTCTCCTTT
GATGGAGCAA AGGGTAGTCG TAAATTTTTA TAA
 
Protein sequence
MRDQINEELR QLEESIPKII KIAQDFKLDF YPMRFEICPG EIIYTFGAYG MPTRFTHWSF 
GKSYHRMKTQ YDYNLSRIYE MVINSDPCYA FLLEGNTIIQ NKMVAAHVLA HCDFFKNNIY
FSHTNPKDII ESMAVAAERF RQYEMIYGQQ KVEAFIDSVL SIQEHIDPHR MIKRKEHCIN
KTKNCCGKKQ DATYDDLWKL DQPEHSCQCQ GDCSKNKQTK LPEQPEKDLL LFIMENARDL
EEWQLDILST MRDEMLYFWP QMQTKIMNEG WASYWHLRIM REMEINEAEA IEFAKMHAGV
VLPSRNSINP YYLGLKMLED IEKRWDKEYG EGAGREKLFE IREMDNDISF LRNYLTKELV
EELDLYLYRK IGHEWKIVEK NWEKVRDHLV YSMTNSGFPV IMVENGDYEQ RGELYLKHAF
EDRELDIKYL EKTLVHIFNL WNRPVYIETE IDNKAALFSF DGAKGSRKFL