| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dred_1963 |
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| Symbol | |
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| ID | 4955863 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Desulfotomaculum reducens MI-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009253 |
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| Strand | - |
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| Start bp | 2153688 |
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| End bp | 2154479 |
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| Gene Length | 792 bp |
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| Protein Length | 263 aa |
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| Translation table | 11 |
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| GC content | 41% |
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| IMG OID | 640181130 |
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| Product | polysaccharide deacetylase |
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| Protein accession | YP_001113306 |
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| Protein GI | 134299810 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG0726] Predicted xylanase/chitin deacetylase |
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| TIGRFAM ID | [TIGR02884] delta-lactam-biosynthetic de-N-acetylase |
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGGATGACA AAGAAAATAA AAAGACCGTT GAAAAAGATA CTAATCAGGA TAAACACCAA
AGTACTGTAA AACCGCAAAA ACCAAAGGAG GTAGTTTCCT CAACCTATGC CAATGAAAAG
ATGGGTTGGT ATTATAAGCC CAATAAAGAG CATCAATTAC CGGAGGTAAA CAACCGTGGC
AAAGAGTCAC TGGCAAAATA TCGCGGTATT TACCATGGAG ATATTAGTGG CAAGAATTTG
TACCTGACCT TTGATGAAGG CTATGAAAAT GGATATACTT CAAAAATTTT AGATACTCTA
AGGGATGCCA ATGTTAAGGT GACATTTTTC ATTACAGGTG ATTACCTTCG GAGAAACCCT
GAACTGGTCA AACGAATGGT AAGAGAAGGA CACATTGTGG GCAATCATAC AGATAATCAT
CCCAGTCTAC CTACGGTCAG TGATGCTACT TTGCAAAAAG AGATTAATTC TTTAAGCGAT
GCATTTACCA AGGAAACCGG AGCAACAATG CAATATTTGC GCCCGCCCAT GGGAGAATAC
AGTGAAAGAA CGTTAAAGTT GACTTATGAA ATGGGCTACA GAAATGTCTT TTGGTCTGTT
GCCATGGTGG ACTGGCGACC GGATGCAGGG ACCCCGGAGC AAAATAAGAA CACAGTAAAA
GAACGTCTGC ATAACGGAGC AGTTATCTTG CTTCATGCTG TTAACAAGGC AAATGCTGAT
ATGCTTGGTA GCTTAATTCA AGAATGCAGG GATGAGGGCT ACCGTTTTTG TGGCCTGGAA
GAAATACAAT AA
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| Protein sequence | MDDKENKKTV EKDTNQDKHQ STVKPQKPKE VVSSTYANEK MGWYYKPNKE HQLPEVNNRG
KESLAKYRGI YHGDISGKNL YLTFDEGYEN GYTSKILDTL RDANVKVTFF ITGDYLRRNP
ELVKRMVREG HIVGNHTDNH PSLPTVSDAT LQKEINSLSD AFTKETGATM QYLRPPMGEY
SERTLKLTYE MGYRNVFWSV AMVDWRPDAG TPEQNKNTVK ERLHNGAVIL LHAVNKANAD
MLGSLIQECR DEGYRFCGLE EIQ
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