Gene Dred_1962 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDred_1962 
Symbol 
ID4955851 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfotomaculum reducens MI-1 
KingdomBacteria 
Replicon accessionNC_009253 
Strand
Start bp2152497 
End bp2153528 
Gene Length1032 bp 
Protein Length343 aa 
Translation table11 
GC content41% 
IMG OID640181129 
Producthypothetical protein 
Protein accessionYP_001113305 
Protein GI134299809 
COG category[R] General function prediction only 
COG ID[COG0613] Predicted metal-dependent phosphoesterases (PHP family) 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value0.0805499 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGATTTATC AGTATTCCGG TGTTGTGCAT ATTCATTCAT TTTATTCGGA TGGTTCTGCT 
GACTTTAAAG GAATAGCCAA AGCGGCTTCA AAGGCAGGAG CCAAATTTAT TCTAATAAAT
GATCACGATA CCTTGGCGGG GTTGCACCGG GAAGGTGAGC AATACCTACA TGGAGTGTTG
GTTCTGGTGG GATCTGAAGT GACCCCAAAG AAGAACCATT TTTTATGCTA CGATATTAAC
TCTGTGCCCA GTAACAAGCT GTTGCCCCAC CAATACGTTA GTCAGGTCTA TGAGCAAGGC
GGCTTTGGAT TTTTAGCTCA TCCTGATCAT AAAGAAAACC CTATGTTTCC AGGTAAAATG
AACTGGGAGG ACTGGGATCT GGATAATGCA GTCGGTTTAG AAATTTGGAA TTACTTTTCA
CAATGGATGG CTAGTTTTAA GAATAAAAAG GGTCTGTTAA AAAGTTTTCT GTTTCCAAAG
GCAACCCTTA GCCCCCCTCG TTCAGAGACC TTATTAAAAT GGGATCGCTT GGGGAAACAA
AGGCCGGTAC CTGCCATAGC AGGGGTTGAT GCCCATGGCG GAAGGCAGTT GAGTTGGATA
CCTAATATAC TTAGTAGTTA TAAGTATCAA TTTAAGACAT TCAGAACCCA TATACTTGCC
AAGGAACCCT TAAAGGGTAT TGTGCATAGG GATCGACATA TTATTTTATC TGCCATAAAA
AGCGGCAGGA GTTATCTTGT TAATCATTGT GCTGGAAGAG TGGAGCATTT TCAATTTTAT
CTCCAGCACT TAAACAACCA ATGGCATATG GGAGAAGAGG TGAAACAACG ACCCAATATG
TCACTAAACG TAATACTTCC GACGAAGGCC CATATGAAAG TAATAAAGGA CGGTAAATTA
TTATTACAAA GAAAAACGAA TTTTCTTCGA CTGCCTAACC CTGATCCCGG AGTCTACAGG
GTGGAAGTAT ATAAAGGTCA TGTCAGACCT CGTCCCTGGA TATTCTCAAA TCATATTTAT
ATAAGGAATT GA
 
Protein sequence
MIYQYSGVVH IHSFYSDGSA DFKGIAKAAS KAGAKFILIN DHDTLAGLHR EGEQYLHGVL 
VLVGSEVTPK KNHFLCYDIN SVPSNKLLPH QYVSQVYEQG GFGFLAHPDH KENPMFPGKM
NWEDWDLDNA VGLEIWNYFS QWMASFKNKK GLLKSFLFPK ATLSPPRSET LLKWDRLGKQ
RPVPAIAGVD AHGGRQLSWI PNILSSYKYQ FKTFRTHILA KEPLKGIVHR DRHIILSAIK
SGRSYLVNHC AGRVEHFQFY LQHLNNQWHM GEEVKQRPNM SLNVILPTKA HMKVIKDGKL
LLQRKTNFLR LPNPDPGVYR VEVYKGHVRP RPWIFSNHIY IRN