Gene Dred_1960 details

Gene Information

• Locus tag: Dred_1960
• Symbol: nusA
• ID: 4955794
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Desulfotomaculum reducens MI-1
• Kingdom: Bacteria
• Replicon accession: NC_009253
• Strand: -
• Start bp: 2150517
• End bp: 2151671
• Gene Length: 1155 bp
• Protein Length: 384 aa
• Translation table: 11
• GC content: 41%
• IMG OID: 640181127
• Product: transcription elongation factor NusA
• Protein accession: YP_001113303
• Protein GI: 134299807
• COG category: [K] Transcription
• COG ID: [COG0195] Transcription elongation factor
• TIGRFAM ID: [TIGR01953] transcription termination factor NusA

Plasmid Coverage information

• Num covering plasmid clones: 6
• Plasmid unclonability p-value: 0.0055359
• Plasmid hitchhiking: Yes
• Plasmid clonability: hitchhiker

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

GTGAACAGTG AGTTCTTAGA AGCCTTGAGA GATTTAGAAA AAGAGAAGGG TATTGCAGTG 
GATGTGCTGT TAGAAGCTAT TGAAGCGGCC TTGTTATCTG CTTATAAACG GAACTTTGGT 
TCGTTACAAA ACGCAAGGGT CCATATTGAT CGAGATACAG GAGATTATAA AGTATATTCC 
CAGCGTGCTG TTGTGGAGGA AGTTGAAGAC GATCGGGTTG AAATTTCCTT AGAAGATGCA 
AGAAAAATTG ACCCTCGGTT CAACCTGGAA GATGTGGTGG AAGATGAAGT CACTCCTAGA 
AATTTTGGCC GTATTGCGGC GCAGACGGCT AAACAAGTTG TTGTTCAGCG AATTCGTGAG 
GCGGAAAGAA ATATCATTTT TGAAGAATTT TCTAACCGTG AAGGTGATAT TCTTACTGGT 
ATTGTGCAAC GAATAGAGAA TAAAAATGTT TTTATTGAGT TGGGTAAAAC AGAGGCTATT 
TTAACACCTT CTGAGCAAAT ACCGAACGAA GATTATAGAC ACGGCGATCG GTTGAAAACT 
TACATAGTGG AGGTTCGCAA AACCACAAAG GGGCCACAGA TTTTAGTGTC CAGGACTCAC 
CCAGGTCTGC TAAAGCGGTT GTTTGAACTG GAGGTCCCTG AACTTCAAGA AGGAGTTGTT 
GAATTAAAAT CCATTGCCAG GGAAGCCGGT TATCGATCTA AAATTGCTGT TTATTCAAAA 
GATGAAAATA TTGATCCAGT GGGTGCATGT GTGGGCCCAA AAGGGATGCG TGTACAAAAT 
ATTGTTACTG AATTGAACGG TGAAAAGATT GACATTATAA AATGGAACCA GGATCCATCA 
AAGTATGTAG CCTCTTCTCT CAGCCCAGCT AAAGTGGTGG CAGTGGAAGT TTGGGAAGAT 
GAGAAAGTAG CCAGAGTTAT TGTGCCTGAT TACCAACTTT CCTTAGCCAT TGGAAAAGAA 
GGACAAAATG CACGTCTTGC TGCAAAGCTG ACAGGGTGGA AAATTGATAT AAAAAGTGAG 
TCCCAGATGA CAGATATTTA TCCAGAATAT GATGCTGAGG AAAACGATGG ATTTTCCACA 
GATGATAATT ATCTAGAAAC CTTTGAGGAC GAATACAAAC ATGTTGATTC GTCCGAAGAG 
AAAAATGGTG AGTAA 

 

Protein sequence

MNSEFLEALR DLEKEKGIAV DVLLEAIEAA LLSAYKRNFG SLQNARVHID RDTGDYKVYS 
QRAVVEEVED DRVEISLEDA RKIDPRFNLE DVVEDEVTPR NFGRIAAQTA KQVVVQRIRE 
AERNIIFEEF SNREGDILTG IVQRIENKNV FIELGKTEAI LTPSEQIPNE DYRHGDRLKT 
YIVEVRKTTK GPQILVSRTH PGLLKRLFEL EVPELQEGVV ELKSIAREAG YRSKIAVYSK 
DENIDPVGAC VGPKGMRVQN IVTELNGEKI DIIKWNQDPS KYVASSLSPA KVVAVEVWED 
EKVARVIVPD YQLSLAIGKE GQNARLAAKL TGWKIDIKSE SQMTDIYPEY DAEENDGFST 
DDNYLETFED EYKHVDSSEE KNGE