Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Dred_1954 |
Symbol | |
ID | 4956091 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Desulfotomaculum reducens MI-1 |
Kingdom | Bacteria |
Replicon accession | NC_009253 |
Strand | - |
Start bp | 2144641 |
End bp | 2145573 |
Gene Length | 933 bp |
Protein Length | 310 aa |
Translation table | 11 |
GC content | 45% |
IMG OID | 640181121 |
Product | tRNA pseudouridine synthase B |
Protein accession | YP_001113297 |
Protein GI | 134299801 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG0130] Pseudouridine synthase |
TIGRFAM ID | [TIGR00431] tRNA pseudouridine 55 synthase |
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Plasmid Coverage information |
Num covering plasmid clones | 19 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | GTGGATGGGG TCATCAATAT CTTAAAGCCT CCGGGAATGA CATCCCACGA TGTTGTATTC TTTGTAAGAC GGGTTACTGG GGTGAAGAAA TGTGGGCATA CTGGTACCCT TGACCCTGGA GCATCGGGTG TTCTCCCAGT ATGTGTAGGC AAAGCTACAC GACTAGCTAG GTTTGTTACA GATGGAGACA AGACTTATAG GGCTGAAATA ACTCTGGGAA TTGAAACATC CAGTCAGGAT GCCTTTGGCA ATGTTATTAG CCGCATCGAT GCATCGGCCA TAAAATTGGA TGACTTTTCC AGTGAATTAC GCAAATTCCA GGGAGAGATT AAACAAACCC CGCCTATGGC CTCAGCCATT AAGGTTAAGG GCAAAAAACT CTATGAACTT GAACGGGAAG GTATAATAGT AGATGTTCCT ACTAGAACGG TTACCATATA TCAGGTGAAT ATTGTAGACA GTTGGGATTG GGGAACCCCA AACCCCAGGG TATTGTTTGA TGTGGCTTGT TCAAAGGGGA CATATGTGCG TACCCTGTGT TCGGATATCG GCAAGGAACT GGGTTGTGGC GCCTATATGT CCTTTTTGTT ACGTTCCCGG GTAGCCGCCT TTGGCTTGCA CAATGCTTAT ACATTGGAGG AAATTGCAGC TTTAGCTGAC AAAAGCCAAC TAGAGAGTGC AGTAATCCCG ATGGCTAAGG CTGTTCAGCA TTTACCCATA GTTGAAATTC ATCCTTCTGC GCAAAAATCA GTATGCTCCG GAGCAACCCT GTATCCGGCG GGTGTAAGAG TAGGATTAGA ATACCTAAAG CCCGAAGGTC TTGTTCAAGT TCAACTAAAT CACGAATTGT TAGGTATTTA TAAGCCCGTT TTAGATGTAA ACGATTTTGG GGAACGCATA ATTCTAAGAC CCGAAGTGGT TTTTGCTTCA TAA
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Protein sequence | MDGVINILKP PGMTSHDVVF FVRRVTGVKK CGHTGTLDPG ASGVLPVCVG KATRLARFVT DGDKTYRAEI TLGIETSSQD AFGNVISRID ASAIKLDDFS SELRKFQGEI KQTPPMASAI KVKGKKLYEL EREGIIVDVP TRTVTIYQVN IVDSWDWGTP NPRVLFDVAC SKGTYVRTLC SDIGKELGCG AYMSFLLRSR VAAFGLHNAY TLEEIAALAD KSQLESAVIP MAKAVQHLPI VEIHPSAQKS VCSGATLYPA GVRVGLEYLK PEGLVQVQLN HELLGIYKPV LDVNDFGERI ILRPEVVFAS
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