Gene Dred_1576 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDred_1576 
Symbol 
ID4958317 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfotomaculum reducens MI-1 
KingdomBacteria 
Replicon accessionNC_009253 
Strand
Start bp1714350 
End bp1715105 
Gene Length756 bp 
Protein Length251 aa 
Translation table11 
GC content50% 
IMG OID640180749 
Producthypothetical protein 
Protein accessionYP_001112929 
Protein GI134299433 
COG category[R] General function prediction only 
COG ID[COG0730] Predicted permeases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value0.0534124 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAATTTAT TAATCGGATT GGCAGCAGGT TTTTTCGGAG GGCTTGTGGG CTTAGGCGGC 
GGCGTGATCA TGATCCCCCT AATGGTCGGT ATTTTGAAAA TGAGTCAGCA TCAGGCCCAC
GGCACAAGTC TTGTGGCACT TGTTTTTACT GGACTATCCG GGGCTGTCAC TTATGCTTTA
AATGGCTCGG TGGATATAGT GGCCTCTGCC CTTTTGGCGT CCACCGCAAT ATTTACCGCT
AGGGCCGGGG CACGATTTGC CAATGCCCTG CCGGAATGGA AGCTTAAAAA ATCTTTCGGT
GGATTTTTAA TTGTGGTCAC CCTGCTCCTA CTTATTAAAC CGTATCTGCC CCACGTTGCC
GAGCCTGCCA TGGGCTGGGT AAAAATCTTG ATCCTTTTAC TGGCCGGGGG ATTCACAGGC
TTCCTTTCCG GGATGATGGG AGTCGGTGGC GGTACAATCA TGGTTCCTTC CATGGTGCTG
CTCATTGGCT TCACCCAGTA CACCGCCCAG GGCTGTTCTC TCTTGGCCAT GGTACCTGTG
GGAATTGTTG GCGCTTATAC CCACTGGCGT TTAGGGAATG TCAGCACCAG TATTTTGCCG
GGATTGATCC CAGGTATCCT GATAGGAACA TTTCTGGGGG GGTCTCTGGC CCATATTTTA
TCTGAAGGAG CTTTGCGAAT TATATTTGCT ATCGTGATGA TTCGGACAGG GGTTAAATAT
TTAAAGACAC CCAAGCCTCA ACCTGATGTG GAGTAA
 
Protein sequence
MNLLIGLAAG FFGGLVGLGG GVIMIPLMVG ILKMSQHQAH GTSLVALVFT GLSGAVTYAL 
NGSVDIVASA LLASTAIFTA RAGARFANAL PEWKLKKSFG GFLIVVTLLL LIKPYLPHVA
EPAMGWVKIL ILLLAGGFTG FLSGMMGVGG GTIMVPSMVL LIGFTQYTAQ GCSLLAMVPV
GIVGAYTHWR LGNVSTSILP GLIPGILIGT FLGGSLAHIL SEGALRIIFA IVMIRTGVKY
LKTPKPQPDV E