Gene Dred_1518 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDred_1518 
Symbol 
ID4955396 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfotomaculum reducens MI-1 
KingdomBacteria 
Replicon accessionNC_009253 
Strand
Start bp1646939 
End bp1648174 
Gene Length1236 bp 
Protein Length411 aa 
Translation table11 
GC content44% 
IMG OID640180693 
Productsodium/hydrogen exchanger 
Protein accessionYP_001112873 
Protein GI134299377 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG0475] Kef-type K+ transport systems, membrane components 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGAAACTT ATGTCATGCT AGAAATTGGC CTTGCTTTGT GCATTGTAGG TGCTGCCGGT 
CTCTTGGCTG CTCGTTTTCG TTTCTCCATT GTGCCTTTCC TTATTCTGGC CGGCATGGCA
GTTGGTCCCC AGGCCCCGGT TATCGGTGTA TTTGATTTTC GTTTTATTGA AAGCACACCG
CTTATTCAGT TTATGGGACG ATTAGGTGTC CTTTTTTTGT TATTTTACTT GGGGCTTGAA
TTTTCTGTGG GGCGCTTGTT AAAGGCAGGT AAATCCATTT TTTTGGGCGG AACCACCTAT
ATGCTGATTA ACTTTTCCCT AGGCATGGCC CTGCCTTACC TATGGGGCTG GCCCTTGAGA
GAAATCTTAG TGGTGGCTGG TATTATTTCC ATCTCTTCCA GTGCCATTGT GGCCAAAGTT
TTAGTTGACT TAAAAAGAAC AGTTAGGGCA GAAACAGAAA TGATTTTAGG TTTAATGCTG
TACCAGGATG TTTTCGTCGC GGTATATCTG TCCATCGTCT CCGGTCTGGT ACTCACAGGT
GCCACCTCCT CGACGACTGT TTTAAAAACT TCTGTGATTG CTTTAGGCTT TATGCTTAGT
TTTATTTTGG TAGGGCGTAA GCTGGCACCC CGCATTAACA AGCTACTGAA TGTACCTTCT
GACGAGATTT TTATGCTGAT TGTTTTTGGT ATTCTCACTT TAGTGGCTGG CTTATCGGAA
ACCATTCATG TGGCCGAAGC TATTGGAGCT TTACTAGTGG GATTGGTGTT GGCAGAGACG
GATCACTTAG AACGCATTGA GCATATTGTG GTACCATTTA GAGATTTTTT TGGGGCCCTC
TTTTTCTTCA GCTTTGGATT GAGTATAGAT CCATTTTCAC TGGGTGGAGC CATCTGGCCC
GCTCTAATCG CTGTTATCGT AACTATAATT GGCAATTTTG TTGCAGGATT AATAGCCGGG
CGTAAGGCAG GCTATTCATA CCAAGGCGCT ACCAATATAG GATTAACCAT TACTTCACGG
GGTGAGTTTT CCATTATTCT GGCTAACCTA GCAAAAGCTG GGGGATTACT TTCAATTTTA
CAACCCTTTG CAGCACTTTA TGTGTTGCTA TTGGCTATTT TAGGACCTCT ATTAACGAAA
GAATCCAAAT GGATATATAG CAAGTTAGCC GGGGTATTTG GCTGGCCATC TATTAAAGAT
AAAAAACAAA GACGGCGAGC CGAAGCTAAA GGGTAG
 
Protein sequence
METYVMLEIG LALCIVGAAG LLAARFRFSI VPFLILAGMA VGPQAPVIGV FDFRFIESTP 
LIQFMGRLGV LFLLFYLGLE FSVGRLLKAG KSIFLGGTTY MLINFSLGMA LPYLWGWPLR
EILVVAGIIS ISSSAIVAKV LVDLKRTVRA ETEMILGLML YQDVFVAVYL SIVSGLVLTG
ATSSTTVLKT SVIALGFMLS FILVGRKLAP RINKLLNVPS DEIFMLIVFG ILTLVAGLSE
TIHVAEAIGA LLVGLVLAET DHLERIEHIV VPFRDFFGAL FFFSFGLSID PFSLGGAIWP
ALIAVIVTII GNFVAGLIAG RKAGYSYQGA TNIGLTITSR GEFSIILANL AKAGGLLSIL
QPFAALYVLL LAILGPLLTK ESKWIYSKLA GVFGWPSIKD KKQRRRAEAK G