Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Dred_1458 |
Symbol | |
ID | 4957159 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Desulfotomaculum reducens MI-1 |
Kingdom | Bacteria |
Replicon accession | NC_009253 |
Strand | + |
Start bp | 1585205 |
End bp | 1587160 |
Gene Length | 1956 bp |
Protein Length | 651 aa |
Translation table | 11 |
GC content | 41% |
IMG OID | 640180633 |
Product | alpha amylase, catalytic region |
Protein accession | YP_001112813 |
Protein GI | 134299317 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG0366] Glycosidases |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 22 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | TTGAATGTTT GGATCTATCA TAACTCACAT GAAGTTTATT ACCGCAACCC TTTCGGGGCT GTGTCATGCG ATGAAAGGGT AATATTATCT TTAACAATAG AAATTGAAGA GGAAGCGCAT AGCATATTTT TGCGTCTGTG GAAGCATGGA CGTGAAGAGG AAAAAATACC AATGCGATTG CGGGAAGGAC ATGGAAATAA AAAGACTTAT CAGGTTGAAA TAAATGTTCC CTCTGTACAG GGATTACTAT GGTATTATTT TATCATTGGT ATAAAAGATA AGACTTATTA CTATGGCAAT AATTATGATC AACTGGGTGG CATAGGGGAA ATCTATGAAC ACGAACCGCC ATCCTACCAG ATTACAGTCT ATAAGAGGAA CCTTGTAACT CCTAACTGGT TTAAGGATGC AGTGATGTAC CAAATCTTTG TTGACCGATT TTGCAATGGT TATGAGGCGG GGCAAGTATT AAACCCGAAA GAGCATTGTA TAATTTACCC CCATTGGGAT GCAACACCTC AGTATGGGAA ATGCCCTGAA ACCGGAAAAA CGGTTTGTTA TGATTTTTTT GGTGGAAATC TACTGGGGGT TATAAAAAAA CTACCTTACT TAAAAGAGCT GGGTATTCGA GTAATATATT TCAATCCCAT CTTTGAGGCA GCCAGCAATC ATAAATACGA TACCGGAGAC TACAAAAAGA TTGATCCCAT GTTTGGAGAC CACGGGGTTT TTCAAGAGTT ATGTAAGAAG GCACAGGAGA TGGGTATTTC TATTATTCTG GATGGGGTTT TTAGTCATAC CGGGAGCAAT AGCCGCTACT TTAACAGGGA TGGTCAATAT CCATCCCTGG GAGCTTATCA ATCCAAGGAT TCACCCTATT ACTCATGGTA TAGATTTACA CATTTTCCCA ATGAATACGA CTGCTGGTGG GGGATTGATA CACTTCCCAA TGTTAATGAA CTGGACCCTT CTTATCAAGA GTATATCATT ACCGGGGAAG ATAGTGTTAT TAAGCATTGG ATGAGAATGG GGGCAAAGGG TTGGCGCTTG GATGTGGTAG ATGAATTACC ACCGGAATTT ATAAAAAAGA TTCGTTCAGT CATGAAACAT CTGGACCCTG AATCAATTTT AATTGGTGAA GTGTGGGAAG ATGCCACCAA CAAGGTCAGT TACGGCCAGA TGCGAGAATA CCTCCTAGGA GAAGAATTGG ATTCCGTGAT GAACTATCCC TTCCGGAATA TATGGCTAGA ATATTTATTG GGGAAAAGAG ATGCCCGTAG CACTCACCTA CGGCTAATGA ACTTATTCGA AAATTACCCA TTACACCATT TCTATTCCAC CATGAATTTA ATTAGCAGCC ATGATGTATC AAGGGCCTTA ACCGTTCTCA GTGATGCACC GCCTGAAGAT ATGCTGTCTA GGGAAGAGCA GGCCAAGGTT CAATTAAGTG AAATCCAACT AGAACGGGGC CTTGCCCGCT TAAAGCTGCT TTCCTTGCTG CAAATGACCT TTCCCGGTGT TCCTTGTATC TACTATGGGG ACGAAGTTGG GATGCATGGT TATAGAGATC CATTGAACAG AGGAACCTAC CCCTGGGGCA AAGAAAACAG TGATTTATTG GCCTGGTACA AAAAGCTTAT CGCATTAAGA AATGAATATG AGGTCCTGCG AACCGGGCTG TGGCGGCCGA TTTACATGCA AGGTCAAATT TATGGTTATT TAAGGGTTAT TAAACAGGGG AAGGATGTCT TTAACCGGCC AGCCAAAAAT CATGTTGCTC TTGTTTTAGT GAACCCCGGC AGAGAAAGTG CAGTAGAGGT ATCCATTCCT TTAAAAAACT GGTGCAATGG TACCATGATG GACCTATTGC AGGTTGATAA GACCTATAAA ATTGAGAATG GTTTATTACA TGTGAAACTG GAACCACTTC AGGGAACTTT ATTAATAGAC AGGTGA
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Protein sequence | MNVWIYHNSH EVYYRNPFGA VSCDERVILS LTIEIEEEAH SIFLRLWKHG REEEKIPMRL REGHGNKKTY QVEINVPSVQ GLLWYYFIIG IKDKTYYYGN NYDQLGGIGE IYEHEPPSYQ ITVYKRNLVT PNWFKDAVMY QIFVDRFCNG YEAGQVLNPK EHCIIYPHWD ATPQYGKCPE TGKTVCYDFF GGNLLGVIKK LPYLKELGIR VIYFNPIFEA ASNHKYDTGD YKKIDPMFGD HGVFQELCKK AQEMGISIIL DGVFSHTGSN SRYFNRDGQY PSLGAYQSKD SPYYSWYRFT HFPNEYDCWW GIDTLPNVNE LDPSYQEYII TGEDSVIKHW MRMGAKGWRL DVVDELPPEF IKKIRSVMKH LDPESILIGE VWEDATNKVS YGQMREYLLG EELDSVMNYP FRNIWLEYLL GKRDARSTHL RLMNLFENYP LHHFYSTMNL ISSHDVSRAL TVLSDAPPED MLSREEQAKV QLSEIQLERG LARLKLLSLL QMTFPGVPCI YYGDEVGMHG YRDPLNRGTY PWGKENSDLL AWYKKLIALR NEYEVLRTGL WRPIYMQGQI YGYLRVIKQG KDVFNRPAKN HVALVLVNPG RESAVEVSIP LKNWCNGTMM DLLQVDKTYK IENGLLHVKL EPLQGTLLID R
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