| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dred_1383 |
|---|
| Symbol | |
|---|
| ID | 4956003 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Desulfotomaculum reducens MI-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009253 |
|---|
| Strand | + |
|---|
| Start bp | 1486872 |
|---|
| End bp | 1487939 |
|---|
| Gene Length | 1068 bp |
|---|
| Protein Length | 355 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 42% |
|---|
| IMG OID | 640180558 |
|---|
| Product | glucose-1-phosphate thymidyltransferase |
|---|
| Protein accession | YP_001112738 |
|---|
| Protein GI | 134299242 |
|---|
| COG category | [M] Cell wall/membrane/envelope biogenesis |
|---|
| COG ID | [COG1209] dTDP-glucose pyrophosphorylase |
|---|
| TIGRFAM ID | [TIGR01208] glucose-1-phosphate thymidylylransferase, long form |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 17 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | GTGAAGGCTT TAATACCATG CGGCGGCAAG GGAACACGAT TACGTCCTTT AACCTTCACC
ACGGCAAAGC CACTTATTCC AGTAGCCAAC AAACCTATAG TTCACTTTAT CATTGAGCAG
ATTTTAGAAG CGGGGATAAA TGATATTGGC ATTATCGTTG CTCCTGAAAC AGACCAGTGC
TTTAGGGCGA CTCTAGGCGA TGGCTCACGG TGGGGGGCAA AAATAACCTA TATTTTACAG
GAAAAGCAGA CAGGATTGGC AGACACTGTA AATAAAGCCA GAGATTTTTT AGGTGATTCT
TCATTTTTAA TGTTTCTGGG GGACAACTTG ATTCAAGGCA GGGTTAAGGA GATTGTAGCC
GATTTTCAGA ATTCCGATAC CGACGCCATC ATACAGTTTA AAAAAGTTAA GGACCCCAGG
CAATTTGGGG TAGCGGTTCT GGATCAAAAC CAACGGGTAA TAAAATTAGT GGAAAAACCC
CAAGATCCCC CCACCGATTT AGCTGTTGCT GGCATTTACC TATTCCGACC GGTAATCCAT
CAAGCTGTGC AAGAGATAAA GCCGTCCTGG CGGGGCGAAC TGGAGATAAC TGATGCTATT
CAAAGATTGG TGGATATGAA TTGCCGGGTG GAAGCCAGGG AATTAAAGGG TTGGTGGTTG
GATACCGGAA AAAAGGAAGA TATTCTAGAG GCTAATCGTG TTATCCTTGA TGATTATGCT
CAGTTTGACA TCCTGGGTGA AGTGGATAAA GAGAGCAGTA TTACCGGTAG GGTTGAGCTT
GGTACAGGTT CAAAAGTTAA AAACAGTATA ATTCGAGGAC CAGTAAGAAT AGGAGACAAT
GTAACCATTA TTAATTCCTT TATAGGACCC TATACAACCA TTGGTAGTGG TTGTATGGTT
GAAAATGTAA GCTTACAATA TTCAGTGGTT TTGGATAATT GTGACCTGAA TAATGTGGAT
ACCATTGAAG ATAGTTTAAT CGGTTATAAC AGCAAGGTTT ACCGGCAAGA AACCCGGAGA
AAGACATTAC GCTTAATGGT GGGGGATGAT TCTGAAATTA CGATATAA
|
|---|
| Protein sequence | MKALIPCGGK GTRLRPLTFT TAKPLIPVAN KPIVHFIIEQ ILEAGINDIG IIVAPETDQC
FRATLGDGSR WGAKITYILQ EKQTGLADTV NKARDFLGDS SFLMFLGDNL IQGRVKEIVA
DFQNSDTDAI IQFKKVKDPR QFGVAVLDQN QRVIKLVEKP QDPPTDLAVA GIYLFRPVIH
QAVQEIKPSW RGELEITDAI QRLVDMNCRV EARELKGWWL DTGKKEDILE ANRVILDDYA
QFDILGEVDK ESSITGRVEL GTGSKVKNSI IRGPVRIGDN VTIINSFIGP YTTIGSGCMV
ENVSLQYSVV LDNCDLNNVD TIEDSLIGYN SKVYRQETRR KTLRLMVGDD SEITI
|
|---|
| |