Gene Dred_1335 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDred_1335 
Symbol 
ID4957068 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfotomaculum reducens MI-1 
KingdomBacteria 
Replicon accessionNC_009253 
Strand+ 
Start bp1431919 
End bp1432524 
Gene Length606 bp 
Protein Length201 aa 
Translation table11 
GC content41% 
IMG OID640180514 
Productcell wall hydrolase, SleB 
Protein accessionYP_001112694 
Protein GI134299198 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG3773] Cell wall hydrolyses involved in spore germination 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones9 
Plasmid unclonability p-value0.0172896 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGCAGCTAA AAAGAAGTGA TTTATTATGG ATGACCTTTG TGATGGCAGC TTTCCTTATG 
TTAATGGCAC AATTCAGTGT TATTAATGCT AAAAAAAATG AAATTGAGAA TAAGCAAATA 
GCGAAGACCC TTTATGAAAC AAACAAGTCA ATGCAGCGGG CTGAAACCGT TGTAGAAAAT 
TCTGGAGTTT ACAAAGTAAA ACCTCAAAAA AAACGACCTG AGAACAATAT AACGGTATCC 
CGTGGTAACT TAAAACGTGA CGAAATAACT TTGATGGCAA GAATTATCGA AGCTGAGGCT 
GCCAATGAGC CCTATGAAGG AAAGATTGCA GTTGGAGCGG TTATTTTAAA CCGAATCGAA 
GACGATAAGT TTCCAGATAA TCTGCATGAA GTGATTTACC AGAAGAGGGC CTTTGAGTCG 
GTGGCAAACA ATCACTATAA AAGAGATTAT AGTACCGAGT CCATTCAGGC GGCCCAGGCA 
GCCATTGCAG GACAGGACCC TACCAATGGG GCATTGTTTT TCTGGAACCC ATCTGTAGCG 
AAAAGTGGCT GGATTTGGTC CAGGCCTGTG ACAGGTAAAA TTGGTAACCA TGTATTTGCA 
AAATAA
 
Protein sequence
MQLKRSDLLW MTFVMAAFLM LMAQFSVINA KKNEIENKQI AKTLYETNKS MQRAETVVEN 
SGVYKVKPQK KRPENNITVS RGNLKRDEIT LMARIIEAEA ANEPYEGKIA VGAVILNRIE 
DDKFPDNLHE VIYQKRAFES VANNHYKRDY STESIQAAQA AIAGQDPTNG ALFFWNPSVA 
KSGWIWSRPV TGKIGNHVFA K