Gene Dred_1292 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDred_1292 
Symbol 
ID4957086 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfotomaculum reducens MI-1 
KingdomBacteria 
Replicon accessionNC_009253 
Strand
Start bp1383081 
End bp1384559 
Gene Length1479 bp 
Protein Length492 aa 
Translation table11 
GC content44% 
IMG OID640180471 
Productsignal transduction histidine kinase 
Protein accessionYP_001112651 
Protein GI134299155 
COG category[T] Signal transduction mechanisms 
COG ID[COG3920] Signal transduction histidine kinase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGCTGCAG AAGCAAGGGA ACTTCAACAG AGTTTAGTTA GCTTGTGCTT AGAAGAATGT 
AACTTGTTAG AAGATGATAT TCTGATTCTA GAGAAAATAA GCACTAATTT GCAATATTTT
GCAGACCTAG CTGTGGCCGA TGTATTTATT GACGTCCTTA CTAGGAACCA AGAACGTGCT
TTGGTGGTAG CCAACGCCAA GCCTACCACG GCTCCTTCTC TATACCGGGG CAGTGTGGTG
GGGGCCTATG CTCTGCAATG TAACGAACCG GCAGTTTTCC AAGTCTTTGA GACTGGTGAG
ACCGTGTTAA ACATGAAAGG CTTAAGTCAG GAAGGGGTAC CCATTCTACA GAGGGTGACA
CCCATTCGAA ATGTGGGGGG CAAAATCATT GCTGTACTGA TCATGGAAAG AGATAATTCC
TTCCAAGTGA AGCAGCAGCA AACCATGAAA TTTCTCTCAG AAACGACTCA GAAGCTTACT
GATACGCTCT TGAATATTAC CCGCGTGGGA GAGGTGTTAC CGACACTGAT CCATGATGCA
CTATTTATTG TGGCTGAGGG GAAAATTTCC TATGCCAACA GAGTGGCCAC CGAGTTAACC
AAGGATCTAA TCAATGGTAT TGAGCCAGTG GGCCTGATGG TGAAACAACT TATTTCTCAG
GTGCCCGAAC TGAGTGTGGT GTTTAGTACG GACTCGGATG CCGAGGAAGT GCAACTCCTT
AAAAATACCT TTTTGGTGAG AGCATTACCG ATCCTAGATA CCGCAGAGGT TCGGGGCAGG
GTATATTTAC TAAGGGACAT TACTGAATTA CGCAAGAAAG AGAAACAGTT GATTGCTAAA
TCCACCGTAA TTAAAGAAAT TCATCATAGG GTTAAAAATA ATTTGCAAAC CATAGCAAGT
CTGATGAGGC TACAGATGAG GCGAGTGCAA AGTGAGGAAG CCAGAATTGC TTTTCAGGAA
AGTATCAATC GCATCCGCTG TATTGCTCTA GTTCATGATA TTTTCTCCCG GGAATCCCCG
GAGATGATTG AACTAAGGGA GTGCATCCAA CGGATAGGCC AAATACTCAT AGAGAATATG
GTATCCTCGG AGCAACAAAT TCAGTTGGAG ATAGCGGGGG ATGAAGTCTA TATTCCATCA
GAACAAGCCA CTTCAACTGC CATTGTTATT AATGAAATTC TACAAAACTC CATAAAATAT
GCATTTATAG GTAATATAAT CGGTAACATA GTTGTTAGTG TAACTGATCA GGGGAATCGG
TTAAGTGTAA CCATCCAAGA CAACGGAAAG GGTTTCCCAC CAGAGTTTGA TATTAAAAAG
AATGCAAATT TGGGGCTTCA GATTACCTAT GCTTTGGTTA CCGAGAGCTT AGGTGGGAAC
ATTGCCATGT ATAACAAGGA TGGTGCAGTG GTTGAAATAG ACTTCCCGAA ATGGGGGGCT
GAGGATGATG CATTCGCTAC GGATTGTGTT GGCGGATGA
 
Protein sequence
MAAEARELQQ SLVSLCLEEC NLLEDDILIL EKISTNLQYF ADLAVADVFI DVLTRNQERA 
LVVANAKPTT APSLYRGSVV GAYALQCNEP AVFQVFETGE TVLNMKGLSQ EGVPILQRVT
PIRNVGGKII AVLIMERDNS FQVKQQQTMK FLSETTQKLT DTLLNITRVG EVLPTLIHDA
LFIVAEGKIS YANRVATELT KDLINGIEPV GLMVKQLISQ VPELSVVFST DSDAEEVQLL
KNTFLVRALP ILDTAEVRGR VYLLRDITEL RKKEKQLIAK STVIKEIHHR VKNNLQTIAS
LMRLQMRRVQ SEEARIAFQE SINRIRCIAL VHDIFSRESP EMIELRECIQ RIGQILIENM
VSSEQQIQLE IAGDEVYIPS EQATSTAIVI NEILQNSIKY AFIGNIIGNI VVSVTDQGNR
LSVTIQDNGK GFPPEFDIKK NANLGLQITY ALVTESLGGN IAMYNKDGAV VEIDFPKWGA
EDDAFATDCV GG