| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dred_1287 |
|---|
| Symbol | |
|---|
| ID | 4956127 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Desulfotomaculum reducens MI-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009253 |
|---|
| Strand | + |
|---|
| Start bp | 1375099 |
|---|
| End bp | 1375605 |
|---|
| Gene Length | 507 bp |
|---|
| Protein Length | 168 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 33% |
|---|
| IMG OID | 640180464 |
|---|
| Product | MarR family transcriptional regulator |
|---|
| Protein accession | YP_001112646 |
|---|
| Protein GI | 134299150 |
|---|
| COG category | [K] Transcription |
|---|
| COG ID | [COG1846] Transcriptional regulators |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 32 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | TTGAGCATAG AAAAATCAGT AAAAGACATA TTAAAAGATA AGGGGGGGGA TTTCGACTTA
GGTTTTGATA CTTTTAAGAT AGAAGATACG TTTGGTTTTA TCATCAATAG ATCAGCAATA
GTCATTAGAA GACGGCTAGC AAAAATGCTG AAAGAGGCGG GGTATGACAT TACGCCTGAA
GAATTTTCCT TACTCAGCAG ACTTTGGGAG GAGGATGGAA TTCAACAAAC AATACTGACA
GAAAAAACAT TAAAGGATAA GACTCGAGTG ACACGTTTAC TTAACAGCTT GATCAAAAAG
TTCTATGTAA GTAAAAAGAC TGATGAGGCC GATCGCAGAA ACTATATTAT TTATTTAACT
GAAGAAGGTT ATGCCATAAA AGCTGATATT GTTAAAATTT TTAAAAAAAT AATGGAGAAT
GCTTCTGAAG ACATTGATCA AGGCGAAATT AACGTGACTA AAAAAGTCCT TAGAAAGATA
TCCCAAAACC TAAATGATAT TGATTAA
|
|---|
| Protein sequence | MSIEKSVKDI LKDKGGDFDL GFDTFKIEDT FGFIINRSAI VIRRRLAKML KEAGYDITPE
EFSLLSRLWE EDGIQQTILT EKTLKDKTRV TRLLNSLIKK FYVSKKTDEA DRRNYIIYLT
EEGYAIKADI VKIFKKIMEN ASEDIDQGEI NVTKKVLRKI SQNLNDID
|
|---|
| |