Gene Dred_1135 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDred_1135 
Symbol 
ID4955355 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfotomaculum reducens MI-1 
KingdomBacteria 
Replicon accessionNC_009253 
Strand
Start bp1208453 
End bp1208998 
Gene Length546 bp 
Protein Length181 aa 
Translation table11 
GC content44% 
IMG OID640180304 
Productputative transcriptional regulator 
Protein accessionYP_001112494 
Protein GI134298998 
COG category[K] Transcription 
COG ID[COG1386] Predicted transcriptional regulator containing the HTH domain 
TIGRFAM ID[TIGR00281] segregation and condensation protein B 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
TTGGCAGTAT TATTTAGAGA TCAAACAAAA TCAGCCTTAG AAGCACTTCT CTTTGTGGCC 
AGTGAACCCC TTACTGTGCA AGCATTGGCA CGAATCGTAG AAATTGATGT GGCAGACGCA
TTGGAACTCC TCTTGGAATT GGCAAAGGAA TACCAAGACA GGCCCGGAGG TTTAAAAATA
GTCCAAGTGT CGGATACCTG GCAAATATGT ACAAGGCCAG AGTGTGCACC ATATATAGAA
AGGTTGTACC GTAAAAGTGG TACAGGCTTA TCAAAGGCTG CCATAGAAAC CCTGGCCATC
ATTGCCTACC GACAGCCCAT CACTCGATCC GAGGTTGAAA TGATACGGGG GGTTAAAGTA
GATTCACCCA TTAATACTTT GCTGGAAAGA AATTTGATAG AAGAAAAGGG AAGGCGAGAA
GGACCTGGTA GACCGGTCCT TTATGGAACC ACCCTGGAAT TTCTAAAACA TTTTGGTTTA
AAGGATGTAT CAGAACTGCC ACCCCTCGAA GAGTTTTTGG TCGAGGGAGA AACAATTGAT
ATTTAG
 
Protein sequence
MAVLFRDQTK SALEALLFVA SEPLTVQALA RIVEIDVADA LELLLELAKE YQDRPGGLKI 
VQVSDTWQIC TRPECAPYIE RLYRKSGTGL SKAAIETLAI IAYRQPITRS EVEMIRGVKV
DSPINTLLER NLIEEKGRRE GPGRPVLYGT TLEFLKHFGL KDVSELPPLE EFLVEGETID
I