Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Dred_1090 |
Symbol | |
ID | 4956679 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Desulfotomaculum reducens MI-1 |
Kingdom | Bacteria |
Replicon accession | NC_009253 |
Strand | + |
Start bp | 1162520 |
End bp | 1163230 |
Gene Length | 711 bp |
Protein Length | 236 aa |
Translation table | 11 |
GC content | 47% |
IMG OID | 640180260 |
Product | glycosyl transferase family protein |
Protein accession | YP_001112450 |
Protein GI | 134298954 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG0463] Glycosyltransferases involved in cell wall biogenesis |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 12 |
Plasmid unclonability p-value | 0.11948 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | GTGGCCAAAG TGTCAGTGGT AATACCCGCC CATAATGAAG CCAATAGAAT TTCCGATACC ATAAAAGGAG TTCAAAGGAT TCCGGAGGTA TCGGAAATTC TTGTGATCGA TGATGCATCC ACAGATGGCA CCGCTGAACT GGCGGAACAG ACAGGAGCTA CCGTAATTAG ATTATCTAAA AATATGGGAA AAGGAGGGGC ACTAAACGCT GGGGTAGCCA AGGCTTCCGG TGATATAGTG GCCCTTTTGG ATGGCGATTT AGGAAGCAGT TCCAGTGAAG CTAGAGCTCT TATATTACCG GTTTTACATA ATACTGCCGA TATGACCATT GCCCAATTTC CCCGTGCCAA GAAAAAGGGT GGTTTTGGAC TGGTAAAAAA TCTGGCCCGA TCCGGTATCC GATATTATGC AGGCTTAGAA AGCAATGCTC CGTTATCCGG TCAGAGGGTG ATGACCCGAC AGGTGTTGGA AACAGTTGTT CCCTTTGCCT CGGGTTATGG TGTTGAAGTG GCCTTAACCA TTAAAGTTGC CCGAGCAGGA TTTCGAGTTC TTGAGGTCCC CACACAAATG TCCCACGCAG AAACCGGCAG GGACCTAAGG GGTTTTATGC ACCGTGGCAA ACAATTTGTT CATGTGGCCA GGGTACTGGC GGGCTGTTTT GTACAATATG GTTTTAATGG TTTTACCAGC GCCAAGGGTT GTCAAAAATA A
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Protein sequence | MAKVSVVIPA HNEANRISDT IKGVQRIPEV SEILVIDDAS TDGTAELAEQ TGATVIRLSK NMGKGGALNA GVAKASGDIV ALLDGDLGSS SSEARALILP VLHNTADMTI AQFPRAKKKG GFGLVKNLAR SGIRYYAGLE SNAPLSGQRV MTRQVLETVV PFASGYGVEV ALTIKVARAG FRVLEVPTQM SHAETGRDLR GFMHRGKQFV HVARVLAGCF VQYGFNGFTS AKGCQK
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