Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Dred_1013 |
Symbol | |
ID | 4956084 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Desulfotomaculum reducens MI-1 |
Kingdom | Bacteria |
Replicon accession | NC_009253 |
Strand | - |
Start bp | 1087211 |
End bp | 1087909 |
Gene Length | 699 bp |
Protein Length | 232 aa |
Translation table | 11 |
GC content | 40% |
IMG OID | 640180183 |
Product | integrase catalytic subunit |
Protein accession | YP_001112373 |
Protein GI | 134298877 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG2801] Transposase and inactivated derivatives |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 30 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGTGCCAAG TGCTTGAAGT GTCAAGAAGC GGTTATTATA GCTGGCGTAA AAGGCCAAAA AGTAAACGTA AAAAGGCTAA TGAAAAATTG TTGGAACAGA TCAAGGACAT CCATAGAAAA TCCCGGGGTC TATACGGGGT CAGGAAGATC ACTAAGGAAC TAAACAACAA AAAGAAGATA AAATGTGGTC ATAACCGGGT ATATAAGCTC ATGAAGGAAA ACGGAATAAG TTCTAAAAGA CCGCGCCGGT TTAAGGCTAC TACCAATTCC AAGCATAATT ATCCAGTGGC CGAAAATTTA TTAAACCAGA ACTTTAAGGT AAACCAACCG AATAAGGTGT GGGTATCAGA CATAACTTAT GTTCCTACTG ATGAAGGTTG GCTTTACTTT GCAGCTATAA TCGACTTGTG TCATAAAAAG ATTGTCGGTT GGTCTATGGA TAGCACAATG ACTAAAGGAT TGGTCATCAA CGCTCTTAAG CAAGCTGTTC GCCGGGCTAG GCCGCCTAAA GGAGTTATCC ATCATTCAGA CCAGGGTAGC CAATATGCAA GCCATGCATA CCAGTCACTT TTAAAAAAGT ACGGCTTTAT TGCAAGTATG AGCCGAAAAG GCAACTGTTA CGATAACGCC TGTGCAGAAT CATTTTTTAG CACCTTAAAA AATGAGCTTA TCCATTTATC ACGTTTCAAG ACCAGGTAG
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Protein sequence | MCQVLEVSRS GYYSWRKRPK SKRKKANEKL LEQIKDIHRK SRGLYGVRKI TKELNNKKKI KCGHNRVYKL MKENGISSKR PRRFKATTNS KHNYPVAENL LNQNFKVNQP NKVWVSDITY VPTDEGWLYF AAIIDLCHKK IVGWSMDSTM TKGLVINALK QAVRRARPPK GVIHHSDQGS QYASHAYQSL LKKYGFIASM SRKGNCYDNA CAESFFSTLK NELIHLSRFK TR
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